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Information on SUBCLASS 4.30.1
Subclass Accession number: 5680
Subclass: 4.30.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 13.8 +/- 19.1
Average RMSD (Å) : 0.780 +/- 0.084

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: pXXhchXh
(φψ)-conformation: aapplpbb
Pattern: [AQRS][IKTV][AQRS][ALT][nsv][akq]x[APY][GKN][as]x[acgn][AFIKV]
Conservation:0.524-0.1290.3110.736-0.244-0.768-0.9621.3151.5841.083-1.054-1.432-0.962
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a8q_*_2321a8q   -233245RKSAQIIPNAELKHHHHHHSTT-EEEaaaaaaxpvxbbb
1c8n_A_1691c8n   A169181RVQLSQTYKAINFHHHHHHSTT-EEEaaaaaaxpvxbbb
1nn4_A_701nn4   A7385SIAANKFAGIRAVHHHHHTSTT--EEaaaaaaxxvbbbb
1usl_A_471usl   A5466ATRTVADPGSLGIHHHHHTSTT-EEEaaaaaabpvxbbb
1usl_A_731usl   A7688QIAANKVPGARCAHHHHHTSTT--EEaaaaaaxpvxbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1c8n_A_1691c8n   A     CACALCIUM ION L - 172
1c8n_A_1691c8n   A     CACALCIUM ION S - 173
1c8n_A_1691c8n   A     CACALCIUM ION Q - 174
1c8n_A_1691c8n   A     CACALCIUM ION T - 175
1c8n_A_1691c8n   A     CACALCIUM ION Y - 176
1c8n_A_1691c8n   A     CACALCIUM ION K - 177
1c8n_A_1691c8n   A     CACALCIUM ION A - 178

Clusters included in this Subclass
CLUSTER: HE.5.256
CLUSTER: HE.6.338