Information on SUBCLASS 4.33.1 |
Subclass Accession number: 5686
Subclass: 4.33.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 17.5 +/- 31.4 Average RMSD (Å) : 1.000 +/- 0.200 Consensus geometry
|
Consensus Sequence: | XXXpXXpX |
(φψ)-conformation: | aapapabp |
Pattern: | [EQR] | [ASTV] | [AV] | [ly] | [FQR] | [LV] | x | [AEL] | [AQT] | [STV] | [KNS] | [CES] | [ADK] | [HKN] | [hp] | [VY] | [gv] | [FLMV] | x |
Conservation: | 1.253 | -0.238 | 0.974 | -1.178 | -0.768 | 1.685 | -0.457 | -1.116 | -0.129 | -0.119 | 0.706 | 0.340 | -0.509 | 0.882 | -1.002 | 1.740 | -1.663 | 0.343 | -0.745 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1kwi_A_32 | 1kwi | A | 40 | 58 | RAVDRLNEQSSEANLYRLL | HHHHHHHHH--SSEEEEEE | aaaaaaaaapaxabxbbpa |
1nns_A_92 | 1nns | A | 94 | 112 | ETAYFLDLTVKCDKPVVMV | HHHHHHHHH----S-EEEE | aaaaaaaaaxaxaxpbbbb |
1nw3_A_168 | 1nw3 | A | 168 | 186 | QVVLQVAAATNCKHHYGVE | HHHHHHHHH---SEEEEEE | aaaaaaaaabaxabbbbbb |
1o7j_A_98 | 1o7j | A | 100 | 118 | ESAYFLHLTVKSDKPVVFV | HHHHHHHHH----S-EEEE | aaaaaaaaaxabaxwbbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1nw3_A_168 | 1nw3 | A | SAMS-ADENOSYLMETHIONINE | Q - 168 |
1nw3_A_168 | 1nw3 | A | SAMS-ADENOSYLMETHIONINE | V - 169 |
1nw3_A_168 | 1nw3 | A | ACTACETATE ION | Y - 183 |
1nw3_A_168 | 1nw3 | A | SAMS-ADENOSYLMETHIONINE | V - 185 |
1nw3_A_168 | 1nw3 | A | SAMS-ADENOSYLMETHIONINE | E - 186 |
Clusters included in this Subclass |
CLUSTER: HE.5.252 |