Logo
Information on SUBCLASS 4.34.1
Subclass Accession number: 5689
Subclass: 4.34.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 11.1 +/- 13.3
Average RMSD (Å) : 1.160 +/- 0.195

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XXXXXhXh
(φψ)-conformation: aabappbb
Pattern: [FIY][nrs][aekq]xx[AEKNQ][ily]x[AES][egks]x[EPQT][egkr][LMP][KLTV][LV]x[ITV]
Conservation:1.688-0.436-0.097-0.911-0.6660.058-0.399-0.9770.728-1.080-0.4200.411-1.2350.187-0.4882.150-0.2541.741
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1gs5_A_171gs5   A2441FSALVNYRESHQRPLVIVHHHHHHHHTT--S-EEEEaaaaaaaaaabaxxxbbb
1k1x_A_311k1x   A3148YRPFMEILEEFPEMKVNVHHHHHHHHTT-TT--EEEaaaaaaaaaabaaxbbbb
1kfw_A_1121kfw   A114131FNQLKQLKAKNPKLKVMIHHHHHHHHTT-TT-EEEEaaaaaaaaaabaaxbbbb
1ny5_A_1441ny5   A149166ILEKIKKISCAECPVLITHHHHHHHHTT--S-EEEEaaaaaaaaaabaxxbbxb
1ueh_A_1181ueh   A124141IRKSEALTAGNTGLTLNIHHHHHHHHTT--S-EEEEaaaaaaaaaaxaFxxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gs5_A_171gs5   A     NLGN-ACETYL-L-GLUTAMATE H - 42
1gs5_A_171gs5   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER H - 42
1kfw_A_1121kfw   A     GOLGLYCEROL L - 120
1kfw_A_1121kfw   A     GOLGLYCEROL K - 123
1kfw_A_1121kfw   A     GOLGLYCEROL N - 124
1ny5_A_1441ny5   A     ADPADENOSINE-5'-DIPHOSPHATE M - 146

Clusters included in this Subclass
CLUSTER: HE.7.28