Logo
Information on SUBCLASS 4.37.1
Subclass Accession number: 5693
Subclass: 4.37.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 10.0 +/- 16.1
Average RMSD (Å) : 0.760 +/- 0.329

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XXXXhXhX
(φψ)-conformation: aababpbb
Pattern: [ACLV][dqr]x[AILV]x[ekl]x[ctv][AEGNQ][CGIKL][DKP][fl]x[ACVY]x
Conservation:0.9220.096-0.4831.3870.610-0.3660.279-0.366-0.205-1.8502.0660.018-1.3800.066-0.793
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ccw_B_1271ccw   B135149CRKVLEAVNLPLQARHHHHHHH-SS-EEEEaaaaaaababxbbxb
1e8c_A_3611e8c   A368382LQAARLHCAGKLWCVHHHHHHT-SS-EEEEaaaaaaabaxxbbbb
1h7w_A_6881h7w   A695709CRWVRQAVQIPFFAKHHHHHHH-SS-EEEEaaaaaaabaxwbbxx
1n7h_A_2581n7h   A264278AMWLMLQQEKPDDYVHHHHHHTSSS--EEEaaaaaaaxabxbbbx
1ooy_A_4561ooy   A456470VDDIKKSTGCDFAVSHHHHHHT-BS--EEEaaaaaaababxbxbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ccw_B_1271ccw   B     TARD(-)-TARTARIC ACID R - 149
1e8c_A_3611e8c   A     MSESELENOMETHIONINE P - 361
1e8c_A_3611e8c   A     MSESELENOMETHIONINE L - 364
1e8c_A_3611e8c   A     MSESELENOMETHIONINE K - 366
1e8c_A_3611e8c   A     MSESELENOMETHIONINE A - 367
1e8c_A_3611e8c   A     MSESELENOMETHIONINE L - 368
1e8c_A_3611e8c   A     MSESELENOMETHIONINE A - 370
1e8c_A_3611e8c   A     MSESELENOMETHIONINE A - 371
1e8c_A_3611e8c   A     MSESELENOMETHIONINE R - 372
1e8c_A_3611e8c   A     MSESELENOMETHIONINE H - 374
1e8c_A_3611e8c   A     MSESELENOMETHIONINE F - 383
1h7w_A_6881h7w   A     FMNFLAVIN MONONUCLEOTIDE K - 709
1n7h_A_2581n7h   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE M - 265
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1h7w_A_6881h7w   A AC5FMN BINDING SITE FOR CHAIN AK - 709

Clusters included in this Subclass
CLUSTER: HE.5.163