Information on SUBCLASS 4.40.1 |
Subclass Accession number: 5697
Subclass: 4.40.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 14.3 +/- 14.3 Average RMSD (Å) : 0.633 +/- 0.153 Consensus geometry
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Consensus Sequence: | pXXcXXXh |
(φψ)-conformation: | aalalpbb |
Pattern: | [AS] | x | x | [ACL] | [K] | [EHY] | x | [GKR] | [KN] | [DGS] | x | [NTV] | [CV] | x |
Conservation: | 0.760 | -0.618 | -0.882 | -0.177 | 2.640 | 0.439 | -1.146 | -0.265 | 0.927 | -0.089 | -0.794 | -0.530 | 0.529 | -0.794 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a99_A_245 | 1a99 | A | 252 | 265 | SNRAKEAKNGVNVS | HHHHHHHT-S--EE | aaaaaaalavxbbb |
1j6u_A_121 | 1j6u | A | 121 | 134 | AHVLKHLRKSPTVF | HHHHHHTT---EEE | aaaaaaalalxxbb |
1ni4_A_141 | 1ni4 | A | 149 | 162 | ALACKYNGKDEVCL | HHHHHHTT----EE | aaaaaaalavbbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1a99_A_245 | 1a99 | A | PUT1,4-DIAMINOBUTANE | D - 247 |
1a99_A_245 | 1a99 | A | PUT1,4-DIAMINOBUTANE | Q - 250 |
1j6u_A_121 | 1j6u | A | MSESELENOMETHIONINE | A - 121 |
1j6u_A_121 | 1j6u | A | MSESELENOMETHIONINE | H - 122 |
1j6u_A_121 | 1j6u | A | MSESELENOMETHIONINE | V - 123 |
1j6u_A_121 | 1j6u | A | MSESELENOMETHIONINE | L - 124 |
1j6u_A_121 | 1j6u | A | MSESELENOMETHIONINE | K - 125 |
1j6u_A_121 | 1j6u | A | MSESELENOMETHIONINE | V - 133 |
1ni4_A_141 | 1ni4 | A | MSESELENOMETHIONINE | P - 143 |
1ni4_A_141 | 1ni4 | A | MSESELENOMETHIONINE | L - 144 |
1ni4_A_141 | 1ni4 | A | MSESELENOMETHIONINE | I - 148 |
1ni4_A_141 | 1ni4 | A | MSESELENOMETHIONINE | Y - 165 |
1ni4_A_141 | 1ni4 | A | TPPTHIAMINE DIPHOSPHATE | Y - 165 |
1ni4_A_141 | 1ni4 | A | MGMAGNESIUM ION | G - 166 |
1ni4_A_141 | 1ni4 | A | TPPTHIAMINE DIPHOSPHATE | G - 166 |
Clusters included in this Subclass |
CLUSTER: HE.5.387 |