Information on SUBCLASS 4.46.1 |
Subclass Accession number: 5704
Subclass: 4.46.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 9.5 +/- 10.9 Average RMSD (Å) : 0.771 +/- 0.206 Consensus geometry
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Consensus Sequence: | XpXphXXh |
(φψ)-conformation: | aabpbabb |
Pattern: | x | x | [ilv] | x | [dekn] | x | [DEKNR] | [FILP] | [ADEK] | x | [ILVY] | [flmvy] | [agik] |
Conservation: | -0.919 | -0.860 | 1.306 | -0.527 | 0.282 | -1.104 | 1.175 | -0.124 | 0.674 | -0.658 | 1.836 | 0.129 | -1.211 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ekk_A_102 | 1ekk | A | 110 | 122 | DIIREVRLAAIRG | HHHHHS--SEEEE | aaaaabxbabbbe |
1eq2_A_40 | 1eq2 | A | 40 | 52 | VNLVDLNIADYMD | HHHHTS--SEEEE | aaaaabbbabbbx |
1es9_A_22 | 1es9 | A | 32 | 44 | ADSKDKEPEVVFI | HHHHH---SEEEE | aaaaabbxabbbb |
1ew2_A_186 | 1ew2 | A | 189 | 201 | QLISNMDIDVILG | HHHHSS--SEEEE | aaaaabxbabbbe |
1j5p_A_10 | 1j5p | A | 14 | 26 | KLVELGNFEKIYA | HHHHHS--SEEEE | aaaaaxbbabbxb |
1mg5_A_17 | 1mg5 | A | 24 | 36 | KELLKRDLKNLVI | HHHTTS--SEEEE | aaaaaxxxabbbx |
1qj4_A_212 | 1qj4 | A | 217 | 229 | WQIENYKPDKVYK | HHHHHS--SEEEE | aaaaabxxabbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ekk_A_102 | 1ekk | A | TZE2-(4-METHYL-THIAZOL-5-YL)-ETHANOL | R - 104 |
1ekk_A_102 | 1ekk | A | CSWCYSTEINE-S-DIOXIDE | R - 121 |
1j5p_A_10 | 1j5p | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | N - 10 |
1j5p_A_10 | 1j5p | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | I - 11 |
1j5p_A_10 | 1j5p | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | G - 12 |
1j5p_A_10 | 1j5p | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | Y - 27 |
1mg5_A_17 | 1mg5 | A | NAHNICOTINAMIDE-ADENINE-DINUCLEOTIDE | G - 17 |
1mg5_A_17 | 1mg5 | A | NAHNICOTINAMIDE-ADENINE-DINUCLEOTIDE | I - 18 |
1mg5_A_17 | 1mg5 | A | NAHNICOTINAMIDE-ADENINE-DINUCLEOTIDE | G - 19 |
1mg5_A_17 | 1mg5 | A | NAHNICOTINAMIDE-ADENINE-DINUCLEOTIDE | L - 37 |
1mg5_A_17 | 1mg5 | A | NAHNICOTINAMIDE-ADENINE-DINUCLEOTIDE | D - 38 |
Clusters included in this Subclass |
CLUSTER: HE.5.126 |