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Information on SUBCLASS 4.46.1
Subclass Accession number: 5704
Subclass: 4.46.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 7

Average sequence ID (%) : 9.5 +/- 10.9
Average RMSD (Å) : 0.771 +/- 0.206

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XpXphXXh
(φψ)-conformation: aabpbabb
Pattern: xx[ilv]x[dekn]x[DEKNR][FILP][ADEK]x[ILVY][flmvy][agik]
Conservation:-0.919-0.8601.306-0.5270.282-1.1041.175-0.1240.674-0.6581.8360.129-1.211
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ekk_A_1021ekk   A110122DIIREVRLAAIRGHHHHHS--SEEEEaaaaabxbabbbe
1eq2_A_401eq2   A4052VNLVDLNIADYMDHHHHTS--SEEEEaaaaabbbabbbx
1es9_A_221es9   A3244ADSKDKEPEVVFIHHHHH---SEEEEaaaaabbxabbbb
1ew2_A_1861ew2   A189201QLISNMDIDVILGHHHHSS--SEEEEaaaaabxbabbbe
1j5p_A_101j5p   A1426KLVELGNFEKIYAHHHHHS--SEEEEaaaaaxbbabbxb
1mg5_A_171mg5   A2436KELLKRDLKNLVIHHHTTS--SEEEEaaaaaxxxabbbx
1qj4_A_2121qj4   A217229WQIENYKPDKVYKHHHHHS--SEEEEaaaaabxxabbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ekk_A_1021ekk   A     TZE2-(4-METHYL-THIAZOL-5-YL)-ETHANOL R - 104
1ekk_A_1021ekk   A     CSWCYSTEINE-S-DIOXIDE R - 121
1j5p_A_101j5p   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE N - 10
1j5p_A_101j5p   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE I - 11
1j5p_A_101j5p   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE G - 12
1j5p_A_101j5p   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE Y - 27
1mg5_A_171mg5   A     NAHNICOTINAMIDE-ADENINE-DINUCLEOTIDE G - 17
1mg5_A_171mg5   A     NAHNICOTINAMIDE-ADENINE-DINUCLEOTIDE I - 18
1mg5_A_171mg5   A     NAHNICOTINAMIDE-ADENINE-DINUCLEOTIDE G - 19
1mg5_A_171mg5   A     NAHNICOTINAMIDE-ADENINE-DINUCLEOTIDE L - 37
1mg5_A_171mg5   A     NAHNICOTINAMIDE-ADENINE-DINUCLEOTIDE D - 38

Clusters included in this Subclass
CLUSTER: HE.5.126