Information on SUBCLASS 4.47.1 |
Subclass Accession number: 5705
Subclass: 4.47.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 12.0 +/- 12.2 Average RMSD (Å) : 0.750 +/- 0.332 Consensus geometry
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Consensus Sequence: | pXhphXXh |
(φψ)-conformation: | aapppabb |
Pattern: | x | x | x | [AFLV] | [AEGT] | [AKS] | x | x | [AEKR] | [ADE] | x | [EPQ] | [IL] | [ADT] | [AKTV] | [IV] | [IMVY] | [GNT] |
Conservation: | -1.303 | -0.006 | -0.535 | -0.471 | -0.727 | 0.334 | -1.175 | -0.791 | -0.023 | -0.023 | -0.729 | 0.916 | 2.053 | 0.046 | -0.599 | 2.456 | 0.297 | 0.281 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1h2e_A_31 | 1h2e | A | 37 | 54 | AMRLGKRLEAVELAAIYT | HHHHHHHTTTS--SEEEE | aaaaaaaaaaxxxabbbb |
1l1q_A_35 | 1l1q | A | 42 | 59 | RKEVTAHYKDVPITKVVG | HHHHHHHTTTS---EEEE | aaaaaaaaaaxwpabbbx |
1o57_A_112 | 1o57 | A | 119 | 136 | GKLFASVFAEREIDVVMT | HHHHHHHTTTS--SEEEE | aaaaaaaaaaxxbabbbb |
2ak3_A_94 | 2ak3 | A | 94 | 111 | LPQAEALDRAYQIDTVIN | HHHHHHHHTT----EEEE | aaaaaaaaaabxxabbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1o57_A_112 | 1o57 | A | 2PENONAETHYLENE GLYCOL | P - 112 |
1o57_A_112 | 1o57 | A | 2PENONAETHYLENE GLYCOL | S - 113 |
1o57_A_112 | 1o57 | A | 2PENONAETHYLENE GLYCOL | L - 115 |
1o57_A_112 | 1o57 | A | 2PENONAETHYLENE GLYCOL | S - 116 |
1o57_A_112 | 1o57 | A | PG4TETRAETHYLENE GLYCOL | S - 116 |
1o57_A_112 | 1o57 | A | P6GHEXAETHYLENE GLYCOL | A - 127 |
1o57_A_112 | 1o57 | A | P6GHEXAETHYLENE GLYCOL | E - 128 |
1o57_A_112 | 1o57 | A | P6GHEXAETHYLENE GLYCOL | R - 129 |
1o57_A_112 | 1o57 | A | P6GHEXAETHYLENE GLYCOL | E - 130 |
1o57_A_112 | 1o57 | A | P6GHEXAETHYLENE GLYCOL | I - 131 |
1o57_A_112 | 1o57 | A | EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID | V - 137 |
2ak3_A_94 | 2ak3 | A | AMPADENOSINE MONOPHOSPHATE | Q - 96 |
Clusters included in this Subclass |
CLUSTER: HE.6.324 |
CLUSTER: HE.7.162 |