Information on SUBCLASS 5.6.1 |
Subclass Accession number: 5760
Subclass: 5.6.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 11 Average sequence ID (%) : 16.1 +/- 21.7 Average RMSD (Å) : 0.782 +/- 0.352 Consensus geometry
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Consensus Sequence: | pXhXpXXhh |
(φψ)-conformation: | aabaappbb |
Pattern: | x | x | x | [ACIVY] | [agrt] | [EHKQSY] | [fhmvy] | x | [DNPRS] | [DHKNST] | x | [ehkpt] | [filpv] | [ailv] | x |
Conservation: | -0.999 | -1.462 | 0.327 | 1.205 | -1.082 | 1.001 | -0.526 | -0.626 | 1.516 | 0.800 | 0.777 | -1.058 | -0.889 | 1.006 | 0.009 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dlj_A_95 | 1dlj | A | 101 | 115 | IKEVLSVNSHATLII | HHHHHHH-SS-EEEE | aaaaaaabaaxxxbx |
1ds6_A_97 | 1ds6 | A | 98 | 112 | FPEVRHHCPSTPIIL | HHHHHHH-TTS-EEE | aaaaaaabaaxpbbx |
1esc_*_149 | 1esc | - | 169 | 183 | LDRIGYFAPDAKRVL | HHHHHHHSTT-EEEE | aaaaaaabaaxxbbx |
1gk8_I_86 | 1gk8 | I | 93 | 107 | IVACTKAFPDAYVRL | HHHHHHH-TTSEEEE | aaaaaaabaaxxbbx |
1iy8_A_47 | 1iy8 | A | 54 | 68 | KAAVLETAPDAEVLT | HHHHHHH-TT--EEE | aaaaaaabaaxxbbb |
1jd1_A_87 | 1jd1 | A | 91 | 105 | NSVYAKYFNTHKPAR | HHHHHHHSSSS--EE | aaaaaaabaabbwxb |
1nul_A_97 | 1nul | A | 97 | 111 | AVAIREMYPKAHFVT | HHHHHHH-TTSEEEE | aaaaaaabaaxxxbb |
1q7z_A_151 | 1q7z | A | 158 | 172 | VLAAREVSRDVFLIA | HHHHHHH-SSS-EEE | aaaaaaabaaxxbbb |
1qd9_A_84 | 1qd9 | A | 88 | 102 | NEVYGQYFDTHKPAR | HHHHHHHSSS---EE | aaaaaaabaaxbwxb |
1ryh_A_116 | 1ryh | A | 117 | 131 | YPEVRHHCPNTPIIL | HHHHHHH-SSS-EEE | aaaaaaabaaxpbbx |
2ngr_A_97 | 2ngr | A | 98 | 112 | VPEITHHCPKTPFLL | HHHHHHH-TT--EEE | aaaaaaabaaxwbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dlj_A_95 | 1dlj | A | NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE | H - 96 |
1dlj_A_95 | 1dlj | A | NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE | T - 99 |
1dlj_A_95 | 1dlj | A | NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE | V - 100 |
1dlj_A_95 | 1dlj | A | NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE | E - 103 |
1ds6_A_97 | 1ds6 | A | GDPGUANOSINE-5'-DIPHOSPHATE | T - 115 |
1qd9_A_84 | 1qd9 | A | HGMERCURY (II) ION | F - 84 |
1qd9_A_84 | 1qd9 | A | HGMERCURY (II) ION | V - 87 |
1qd9_A_84 | 1qd9 | A | HGMERCURY (II) ION | N - 88 |
1qd9_A_84 | 1qd9 | A | HGMERCURY (II) ION | R - 102 |
1qd9_A_84 | 1qd9 | A | HGMERCURY (II) ION | C - 104 |
1qd9_A_84 | 1qd9 | A | HGMERCURY (II) ION | V - 105 |
1qd9_A_84 | 1qd9 | A | HGMERCURY (II) ION | E - 106 |
Clusters included in this Subclass |
CLUSTER: HE.3.215 |
CLUSTER: HE.5.78 |