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Information on SUBCLASS 5.6.2
Subclass Accession number: 5761
Subclass: 5.6.2 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 7

Average sequence ID (%) : 15.8 +/- 15.1
Average RMSD (Å) : 0.843 +/- 0.387

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 135-180 rho (°): 225-270
Consensus Sequence: XXcPpXXhh
(φψ)-conformation: aabaappbb
Pattern: xx[ailv][aekl]xx[DHN][AP][EHKNRST]x[adp][ilv][gily]
Conservation:-0.868-1.060-0.174-0.340-0.737-0.3591.2642.629-0.090-0.2900.3610.341-0.677
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1j93_A_2291j93   A237249DSVKLTHPNLPLIHHHHHHSTT--EEaaaaaabaaxwbb
1jz7_A_4661jz7   A473485RWIKSVDPSRPVQHHHHHH-TTS-EEaaaaaabaabxbb
1n8y_C_4611n8y   C461473WDQLFRNPHQALLHHHH--STT--EEaaaaxabaaxbbb
1nij_A_1671nij   A171183ERLARINARAPVYHHHHHH-SSS-EEaaaaaabaaxxbb
1pvd_A_4171pvd   A427439FAAEEIDPKKRVIHHHHHH-TT--EEaaaaaabaaxbbb
1qe5_A_1771qe5   A181193ELAHRVDPTLPEGHHHHHH-TT--EEaaaaaabaapxbb
1tyf_A_371tyf   A4860LFLEAENPEKDIYHHHHHH-SSS-EEaaaaaabaaxpbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1jz7_A_4661jz7   A     DMSDIMETHYL SULFOXIDE A - 466
1jz7_A_4661jz7   A     DMSDIMETHYL SULFOXIDE P - 480
1jz7_A_4661jz7   A     DMSDIMETHYL SULFOXIDE S - 481
1jz7_A_4661jz7   A     DMSDIMETHYL SULFOXIDE R - 482
1pvd_A_4171pvd   A     TPPTHIAMINE DIPHOSPHATE I - 442
1pvd_A_4171pvd   A     TPPTHIAMINE DIPHOSPHATE G - 443
1pvd_A_4171pvd   A     MGMAGNESIUM ION G - 443
1qe5_A_1771qe5   A     PO4PHOSPHATE ION Y - 195

Clusters included in this Subclass
CLUSTER: HE.6.57