Information on SUBCLASS 5.6.3 |
Subclass Accession number: 5762
Subclass: 5.6.3 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 3.1 (>50 %) |
Number of loops: 6 Average sequence ID (%) : 14.0 +/- 14.5 Average RMSD (Å) : 0.750 +/- 0.274 Consensus geometry
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Consensus Sequence: | XXXPphXhh |
(φψ)-conformation: | aabaappbb |
Pattern: | x | [anqr] | [ailv] | [alv] | [efk] | [afl] | [afiv] | [CHKRS] | [ekmr] | [aftv] | x | [EP] | [DENT] | [CKL] | [ehpr] | [lv] | [fgivy] | [lvy] | [qsy] |
Conservation: | -1.094 | -0.519 | 0.110 | 0.033 | 0.129 | -0.215 | -0.580 | -0.152 | -0.002 | -0.616 | -0.589 | 3.537 | 1.054 | 0.427 | -0.665 | 0.419 | -0.935 | -0.084 | -0.258 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1i24_A_110 | 1i24 | A | 125 | 143 | LNVLFAIKEFGEECHLVKL | HHHHHHHHHH-TT-EEEEE | aaaaaaaaaabaaxxxbbx |
1j93_A_229 | 1j93 | A | 233 | 251 | KQIVDSVKLTHPNLPLILY | HHHHHHHHHHSTT--EEEE | aaaaaaaaaabaaxwbbxb |
1lr7_A_113 | 1lr7 | A | 114 | 132 | CALLKARCKEQPELEVQYQ | HHHHHHHHHT-TT--EEEE | aaaaaaaaaabaaxbxabx |
1qe5_A_177 | 1qe5 | A | 177 | 195 | PRLRELAHRVDPTLPEGVY | HHHHHHHHHH-TT--EEEE | aaaaaaaaaabaapxbbbb |
1yaa_A_107 | 1yaa | A | 113 | 131 | HISAKFFSKFFPDKLVYLS | HHHHHHHHHH-TT--EEEE | aaaaaaaaaabaaxxbxbx |
2ay1_A_107 | 2ay1 | A | 113 | 131 | RQALELARMANPDLRVFVS | HHHHHHHHHH-TT--EEEE | aaaaaaaaaabaaxbbbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1i24_A_110 | 1i24 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | Y - 115 |
1i24_A_110 | 1i24 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | N - 119 |
1i24_A_110 | 1i24 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | N - 120 |
1i24_A_110 | 1i24 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | G - 123 |
1i24_A_110 | 1i24 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | L - 143 |
1qe5_A_177 | 1qe5 | A | PO4PHOSPHATE ION | Y - 195 |
1yaa_A_107 | 1yaa | A | PLPPYRIDOXAL-5'-PHOSPHATE | S - 107 |
1yaa_A_107 | 1yaa | A | PLPPYRIDOXAL-5'-PHOSPHATE | G - 108 |
1yaa_A_107 | 1yaa | A | MAEMALEIC ACID | T - 109 |
1yaa_A_107 | 1yaa | A | PLPPYRIDOXAL-5'-PHOSPHATE | T - 109 |
1yaa_A_107 | 1yaa | A | PLPPYRIDOXAL-5'-PHOSPHATE | G - 110 |
1yaa_A_107 | 1yaa | A | PLPPYRIDOXAL-5'-PHOSPHATE | L - 112 |
2ay1_A_107 | 2ay1 | A | PLPPYRIDOXAL-5'-PHOSPHATE | G - 107 |
Clusters included in this Subclass |
CLUSTER: HE.4.189 |
CLUSTER: HE.5.179 |