Logo
Information on SUBCLASS 5.6.3
Subclass Accession number: 5762
Subclass: 5.6.3 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 3.1 (>50 %)  
Number of loops: 6

Average sequence ID (%) : 14.0 +/- 14.5
Average RMSD (Å) : 0.750 +/- 0.274

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XXXPphXhh
(φψ)-conformation: aabaappbb
Pattern: x[anqr][ailv][alv][efk][afl][afiv][CHKRS][ekmr][aftv]x[EP][DENT][CKL][ehpr][lv][fgivy][lvy][qsy]
Conservation:-1.094-0.5190.1100.0330.129-0.215-0.580-0.152-0.002-0.616-0.5893.5371.0540.427-0.6650.419-0.935-0.084-0.258
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1i24_A_1101i24   A125143LNVLFAIKEFGEECHLVKLHHHHHHHHHH-TT-EEEEEaaaaaaaaaabaaxxxbbx
1j93_A_2291j93   A233251KQIVDSVKLTHPNLPLILYHHHHHHHHHHSTT--EEEEaaaaaaaaaabaaxwbbxb
1lr7_A_1131lr7   A114132CALLKARCKEQPELEVQYQHHHHHHHHHT-TT--EEEEaaaaaaaaaabaaxbxabx
1qe5_A_1771qe5   A177195PRLRELAHRVDPTLPEGVYHHHHHHHHHH-TT--EEEEaaaaaaaaaabaapxbbbb
1yaa_A_1071yaa   A113131HISAKFFSKFFPDKLVYLSHHHHHHHHHH-TT--EEEEaaaaaaaaaabaaxxbxbx
2ay1_A_1072ay1   A113131RQALELARMANPDLRVFVSHHHHHHHHHH-TT--EEEEaaaaaaaaaabaaxbbbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1i24_A_1101i24   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE Y - 115
1i24_A_1101i24   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE N - 119
1i24_A_1101i24   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE N - 120
1i24_A_1101i24   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE G - 123
1i24_A_1101i24   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE L - 143
1qe5_A_1771qe5   A     PO4PHOSPHATE ION Y - 195
1yaa_A_1071yaa   A     PLPPYRIDOXAL-5'-PHOSPHATE S - 107
1yaa_A_1071yaa   A     PLPPYRIDOXAL-5'-PHOSPHATE G - 108
1yaa_A_1071yaa   A     MAEMALEIC ACID T - 109
1yaa_A_1071yaa   A     PLPPYRIDOXAL-5'-PHOSPHATE T - 109
1yaa_A_1071yaa   A     PLPPYRIDOXAL-5'-PHOSPHATE G - 110
1yaa_A_1071yaa   A     PLPPYRIDOXAL-5'-PHOSPHATE L - 112
2ay1_A_1072ay1   A     PLPPYRIDOXAL-5'-PHOSPHATE G - 107

Clusters included in this Subclass
CLUSTER: HE.4.189
CLUSTER: HE.5.179