Information on SUBCLASS 5.8.2 |
Subclass Accession number: 5768
Subclass: 5.8.2 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 24.3 +/- 30.0 Average RMSD (Å) : 1.033 +/- 0.197 Consensus geometry
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Consensus Sequence: | XXhpXGphh |
(φψ)-conformation: | aapbpgpbb |
Pattern: | [eknt] | [aglm] | [aef] | [aekn] | x | [glmt] | [ael] | [aest] | x | [agm] | x | x | [g] | [qrs] | x | x | [aikmv] |
Conservation: | 0.212 | -0.391 | -0.324 | 0.099 | -0.540 | -0.530 | -0.429 | 0.180 | -0.631 | 0.273 | -0.184 | -0.999 | 3.580 | 0.560 | -0.378 | -0.233 | -0.264 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1aya_A_13 | 1aya | A | 15 | 31 | EAENLLLTRGVDGSFLA | HHHHHHHHT--TTEEEE | aaaaaaaaaxbpgxbbb |
1azs_A_509 | 1azs | A | 512 | 528 | TLANHMEAGGKAGRIHI | HHHHHHHHT--TTSEEE | aaaaaaaaaxbpvbxxb |
1c9h_A_57 | 1c9h | A | 57 | 73 | KGFEEGAAQMSLGQRAK | HHHHHHHHT--TT-EEE | aaaaaaaaabxpvxbbx |
1fx4_A_1034 | 1fx4 | A | 1037 | 1053 | NMAARTESVANGGQVLM | HHHHHHHHH--TT-EEE | aaaaaaaaaxxxvbbbb |
2shp_A_119 | 2shp | A | 121 | 137 | EAEKLLTEKGKHGSFLV | HHHHHHHHT--TTEEEE | aaaaaaaaaxbpvxbbb |
2shp_A_13 | 2shp | A | 15 | 31 | EAENLLLTRGVDGSFLA | HHHHHHHHH--TTEEEE | aaaaaaaaabbpvxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1aya_A_13 | 1aya | A | PHSPHOSPHONO GROUP | G - 13 |
1aya_A_13 | 1aya | A | PHSPHOSPHONO GROUP | R - 32 |
1aya_A_13 | 1aya | A | PHSPHOSPHONO GROUP | P - 33 |
1azs_A_509 | 1azs | A | FKPMETHYLPIPERAZINOFORSKOLIN | N - 509 |
1azs_A_509 | 1azs | A | FKPMETHYLPIPERAZINOFORSKOLIN | V - 511 |
1azs_A_509 | 1azs | A | FKPMETHYLPIPERAZINOFORSKOLIN | T - 512 |
1azs_A_509 | 1azs | A | FKPMETHYLPIPERAZINOFORSKOLIN | N - 515 |
1azs_A_509 | 1azs | A | FKPMETHYLPIPERAZINOFORSKOLIN | E - 518 |
1c9h_A_57 | 1c9h | A | RAPRAPAMYCIN IMMUNOSUPPRESSANT DRUG | K - 57 |
1c9h_A_57 | 1c9h | A | RAPRAPAMYCIN IMMUNOSUPPRESSANT DRUG | F - 59 |
Clusters included in this Subclass |
CLUSTER: HE.5.180 |
CLUSTER: HE.6.285 |