Logo
Information on SUBCLASS 5.8.2
Subclass Accession number: 5768
Subclass: 5.8.2 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 24.3 +/- 30.0
Average RMSD (Å) : 1.033 +/- 0.197

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: XXhpXGphh
(φψ)-conformation: aapbpgpbb
Pattern: [eknt][aglm][aef][aekn]x[glmt][ael][aest]x[agm]xx[g][qrs]xx[aikmv]
Conservation:0.212-0.391-0.3240.099-0.540-0.530-0.4290.180-0.6310.273-0.184-0.9993.5800.560-0.378-0.233-0.264
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aya_A_131aya   A1531EAENLLLTRGVDGSFLAHHHHHHHHT--TTEEEEaaaaaaaaaxbpgxbbb
1azs_A_5091azs   A512528TLANHMEAGGKAGRIHIHHHHHHHHT--TTSEEEaaaaaaaaaxbpvbxxb
1c9h_A_571c9h   A5773KGFEEGAAQMSLGQRAKHHHHHHHHT--TT-EEEaaaaaaaaabxpvxbbx
1fx4_A_10341fx4   A10371053NMAARTESVANGGQVLMHHHHHHHHH--TT-EEEaaaaaaaaaxxxvbbbb
2shp_A_1192shp   A121137EAEKLLTEKGKHGSFLVHHHHHHHHT--TTEEEEaaaaaaaaaxbpvxbbb
2shp_A_132shp   A1531EAENLLLTRGVDGSFLAHHHHHHHHH--TTEEEEaaaaaaaaabbpvxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1aya_A_131aya   A     PHSPHOSPHONO GROUP G - 13
1aya_A_131aya   A     PHSPHOSPHONO GROUP R - 32
1aya_A_131aya   A     PHSPHOSPHONO GROUP P - 33
1azs_A_5091azs   A     FKPMETHYLPIPERAZINOFORSKOLIN N - 509
1azs_A_5091azs   A     FKPMETHYLPIPERAZINOFORSKOLIN V - 511
1azs_A_5091azs   A     FKPMETHYLPIPERAZINOFORSKOLIN T - 512
1azs_A_5091azs   A     FKPMETHYLPIPERAZINOFORSKOLIN N - 515
1azs_A_5091azs   A     FKPMETHYLPIPERAZINOFORSKOLIN E - 518
1c9h_A_571c9h   A     RAPRAPAMYCIN IMMUNOSUPPRESSANT DRUG K - 57
1c9h_A_571c9h   A     RAPRAPAMYCIN IMMUNOSUPPRESSANT DRUG F - 59

Clusters included in this Subclass
CLUSTER: HE.5.180
CLUSTER: HE.6.285