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Information on SUBCLASS 5.10.2
Subclass Accession number: 5773
Subclass: 5.10.2 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 29.8 +/- 36.1
Average RMSD (Å) : 1.033 +/- 0.404

Consensus geometry
d (Å): 19 delta (°): 135-180 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XhXXXhXXh
(φψ)-conformation: aalbpbpbb
Pattern: [AP][EY][FL][AR][KST][EY][FI][AN][DR][HI][FV][GKR]x[PQ][ILV][AGS][CK][CV][S]
Conservation:-0.020-0.0170.758-0.513-0.943-0.0170.758-0.822-0.654-0.650-0.032-1.298-1.3030.7730.829-0.5890.1550.6292.956
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dkr_A_181dkr   A1836PELAKEIADIVGVQLGKCSHHHHHHHHHHHT--B--EEaaaaaaaaaaavbxxpxbb
1m1n_B_931m1n   B97115AYFRSYFNRHFREPVSCVSHHHHHHHHHHHSS----EEaaaaaaaaaaalbxbxbbb
1qgu_B_911qgu   B95113AYFRTYFNRHFKEPIACVSHHHHHHHHHHHTS----EEaaaaaaaaaaavbxbxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1m1n_B_931m1n   B     CLFFE(8)-S(7) CLUSTER Q - 93
1m1n_B_931m1n   B     CLFFE(8)-S(7) CLUSTER G - 94
1m1n_B_931m1n   B     CLFFE(8)-S(7) CLUSTER C - 95
1m1n_B_931m1n   B     CLFFE(8)-S(7) CLUSTER V - 96
1m1n_B_931m1n   B     CACALCIUM ION Y - 98
1m1n_B_931m1n   B     HCA3-HYDROXY-3-CARBOXY-ADIPIC ACID Y - 98
1m1n_B_931m1n   B     CLFFE(8)-S(7) CLUSTER Y - 98
1m1n_B_931m1n   B     CLFFE(8)-S(7) CLUSTER F - 99
1m1n_B_931m1n   B     CACALCIUM ION S - 101
1m1n_B_931m1n   B     HCA3-HYDROXY-3-CARBOXY-ADIPIC ACID S - 101
1m1n_B_931m1n   B     CACALCIUM ION R - 105
1m1n_B_931m1n   B     HCA3-HYDROXY-3-CARBOXY-ADIPIC ACID R - 105
1m1n_B_931m1n   B     CACALCIUM ION F - 107
1m1n_B_931m1n   B     CACALCIUM ION R - 108
1m1n_B_931m1n   B     CACALCIUM ION E - 109
1m1n_B_931m1n   B     CACALCIUM ION P - 110
1qgu_B_911qgu   B     CLFFE(8)-S(7) CLUSTER Q - 91
1qgu_B_911qgu   B     CLFFE(8)-S(7) CLUSTER G - 92
1qgu_B_911qgu   B     CLFFE(8)-S(7) CLUSTER C - 93
1qgu_B_911qgu   B     CLFFE(8)-S(7) CLUSTER V - 94
1qgu_B_911qgu   B     HCA3-HYDROXY-3-CARBOXY-ADIPIC ACID Y - 96
1qgu_B_911qgu   B     CLFFE(8)-S(7) CLUSTER Y - 96
1qgu_B_911qgu   B     CLFFE(8)-S(7) CLUSTER F - 97
1qgu_B_911qgu   B     HCA3-HYDROXY-3-CARBOXY-ADIPIC ACID T - 99
1qgu_B_911qgu   B     HCA3-HYDROXY-3-CARBOXY-ADIPIC ACID R - 103
1qgu_B_911qgu   B     MO2MAGNESIUM ION, 2 WATERS COORDINATED F - 105
1qgu_B_911qgu   B     MO2MAGNESIUM ION, 2 WATERS COORDINATED K - 106
1qgu_B_911qgu   B     MO2MAGNESIUM ION, 2 WATERS COORDINATED E - 107
1qgu_B_911qgu   B     MO2MAGNESIUM ION, 2 WATERS COORDINATED P - 108

Clusters included in this Subclass
CLUSTER: HE.5.281