Information on SUBCLASS 5.11.2 |
Subclass Accession number: 5776
Subclass: 5.11.2 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0004872 (>75 %) GO:0004888 (>75 %) GO:0045012 (>75 %) SCOP : 48725 (>75 %) 48726 (>75 %) 48942 (>75 %) 54451 (>75 %) 54452 (>75 %) 54453 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 48.7 +/- 27.2 Average RMSD (Å) : 0.725 +/- 0.359 Consensus geometry
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Consensus Sequence: | hXRXXXPpX |
(φψ)-conformation: | aapbbppbb |
Pattern: | [CW] | x | [HR] | [NR] | [Y] | [gl] | x | [gn] | [DEG] | [KNS] | [EF] | [LT] | [LV] | [PQ] | [R] | [AR] | [DV] | [ep] | [P] | [EKT] | [TV] | [HT] | [V] | [TY] | [HP] |
Conservation: | 0.827 | -0.619 | 0.601 | 0.215 | 2.508 | -1.598 | -0.841 | -1.037 | -0.485 | -0.368 | -0.602 | -0.222 | 0.006 | -0.013 | 1.385 | -0.346 | -0.891 | -0.974 | 2.508 | -0.491 | -0.170 | -0.233 | 0.824 | -0.137 | 0.152 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1d5m_B_79 | 1d5m | B | 79 | 103 | CRHNYGVGESFTVQRRVYPEVTVYP | HHHHHHHHGGGTTT--B--EEEEEE | aaaaaaaaaaaaaaxbbxxbbbbbx |
1fng_B_79 | 1fng | B | 79 | 103 | CRHNYEIFDNFLVPRRVEPTVTVYP | HHHHHHHHTTTTTT--B--EEEEEE | aaaaaaaaaaNaaapbbxxbbbbbx |
1fv1_B_79 | 1fv1 | B | 79 | 103 | CRHNYGVGESFTVQRRVEPKVTVYP | HHHHHHHHGGGTTT--B--EEEEEE | aaaaaaaaaaaaaaxbbxxbbbbbx |
1k5n_A_163 | 1k5n | A | 167 | 191 | WLRRYLENGKETLQRADPPKTHVTH | HHHHHHHHTTTTTT--B--EEEEEE | aaaaaaaaaaaaaabxbwxxbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1d5m_B_79 | 1d5m | B | HACBETA-CYCLOHEXYL-ALANINE | H - 81 |
1d5m_B_79 | 1d5m | B | HACBETA-CYCLOHEXYL-ALANINE | N - 82 |
1d5m_B_79 | 1d5m | B | HACBETA-CYCLOHEXYL-ALANINE | Y - 83 |
1d5m_B_79 | 1d5m | B | HACBETA-CYCLOHEXYL-ALANINE | V - 85 |
1d5m_B_79 | 1d5m | B | HACBETA-CYCLOHEXYL-ALANINE | G - 86 |
1d5m_B_79 | 1d5m | B | HACBETA-CYCLOHEXYL-ALANINE | E - 87 |
1d5m_B_79 | 1d5m | B | HACBETA-CYCLOHEXYL-ALANINE | F - 89 |
1d5m_B_79 | 1d5m | B | HACBETA-CYCLOHEXYL-ALANINE | T - 90 |
1fv1_B_79 | 1fv1 | B | CRYPROPANE-1,2,3-TRIOL | R - 94 |
1fv1_B_79 | 1fv1 | B | CRYPROPANE-1,2,3-TRIOL | V - 95 |
1fv1_B_79 | 1fv1 | B | CRYPROPANE-1,2,3-TRIOL | E - 96 |
Clusters included in this Subclass |
CLUSTER: HE.10.15 |