Information on SUBCLASS 3.2.5 |
Subclass Accession number: 578
Subclass: 3.2.5 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 2.7.1 (>75 %) 2.7.1.112 GO : GO:0003677 (>75 %) GO:0003684 (>75 %) GO:0004672 (>75 %) GO:0005515 (>50 %) GO:0005524 (>75 %) GO:0016301 (>75 %) GO:0016773 (>75 %) GO:0030554 (>75 %) SCOP : 48333 (>75 %) 48334 (>75 %) 48335 (>75 %) 55549 (>75 %) 55550 (>75 %) 55551 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 16.7 +/- 26.0 Average RMSD (Å) : 0.650 +/- 0.412 Consensus geometry
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Consensus Sequence: | ppXXhhX |
(φψ)-conformation: | bbaaaep |
Pattern: | [KV] | [IVW] | x | [efy] | [DNT] | [AEP] | [fv] | [fhy] | [AG] | [ky] | [QSY] | x | x | [AIVY] |
Conservation: | 0.897 | 0.314 | -1.328 | -0.671 | 0.993 | -0.155 | -1.147 | 0.369 | 2.529 | -0.376 | 0.043 | -0.348 | -0.820 | -0.300 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1e3m_A_464 | 1e3m | A | 464 | 477 | KVGFNAVHGYYIQI | EEEEETTTEEEEEE | bbbbbaaaexbbbb |
1ewq_A_439 | 1ewq | A | 439 | 452 | KVGYNAVFGYYLEV | EEEEETTTEEEEEE | bbbbbaaaexbbbb |
1l6p_A_64 | 1l6p | A | 64 | 77 | VWHEDEFYGKSEIY | EEEEETTTEEEEEE | bxbbbaaaexbxbb |
1qg7_A_23 | 1qg7 | A | 27 | 40 | KILNTPNCALQIVA | EEEEETTTEEEEEE | bbbbbaaaexbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ewq_A_439 | 1ewq | A | MSESELENOMETHIONINE | V - 440 |
1ewq_A_439 | 1ewq | A | MSESELENOMETHIONINE | G - 441 |
1ewq_A_439 | 1ewq | A | MSESELENOMETHIONINE | Y - 448 |
1ewq_A_439 | 1ewq | A | MSESELENOMETHIONINE | Y - 449 |
1ewq_A_439 | 1ewq | A | MSESELENOMETHIONINE | L - 450 |
Clusters included in this Subclass |
CLUSTER: HA.2.87 |