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Information on SUBCLASS 3.2.5
Subclass Accession number: 578
Subclass: 3.2.5 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.7.1 (>75 %)  2.7.1.112
GO : GO:0003677 (>75 %)  GO:0003684 (>75 %)  GO:0004672 (>75 %)  GO:0005515 (>50 %)  GO:0005524 (>75 %)  GO:0016301 (>75 %)  GO:0016773 (>75 %)  GO:0030554 (>75 %)  
SCOP : 48333 (>75 %)  48334 (>75 %)  48335 (>75 %)  55549 (>75 %)  55550 (>75 %)  55551 (>75 %)  
Number of loops: 4

Average sequence ID (%) : 16.7 +/- 26.0
Average RMSD (Å) : 0.650 +/- 0.412

Consensus geometry
d (Å): 3 delta (°): 45-90 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: ppXXhhX
(φψ)-conformation: bbaaaep
Pattern: [KV][IVW]x[efy][DNT][AEP][fv][fhy][AG][ky][QSY]xx[AIVY]
Conservation:0.8970.314-1.328-0.6710.993-0.155-1.1470.3692.529-0.3760.043-0.348-0.820-0.300
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1e3m_A_4641e3m   A464477KVGFNAVHGYYIQIEEEEETTTEEEEEEbbbbbaaaexbbbb
1ewq_A_4391ewq   A439452KVGYNAVFGYYLEVEEEEETTTEEEEEEbbbbbaaaexbbbb
1l6p_A_641l6p   A6477VWHEDEFYGKSEIYEEEEETTTEEEEEEbxbbbaaaexbxbb
1qg7_A_231qg7   A2740KILNTPNCALQIVAEEEEETTTEEEEEEbbbbbaaaexbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ewq_A_4391ewq   A     MSESELENOMETHIONINE V - 440
1ewq_A_4391ewq   A     MSESELENOMETHIONINE G - 441
1ewq_A_4391ewq   A     MSESELENOMETHIONINE Y - 448
1ewq_A_4391ewq   A     MSESELENOMETHIONINE Y - 449
1ewq_A_4391ewq   A     MSESELENOMETHIONINE L - 450

Clusters included in this Subclass
CLUSTER: HA.2.87