ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 5.13.3

Subclass Accession number: 5781
Subclass: 5.13.3

Type: HE alpha-beta
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : - (>50 %)  2 (>75 %)  3 (>50 %)
GO : GO:0016798 (>75 %)  GO:0016799 (>75 %)  GO:0019104 (>75 %)
SCOP : 52140 (>75 %)  52141 (>75 %)  52142 (>75 %)

Number of loops: 3

Average sequence ID (%) : 71.7 +/- -27.5
Average RMSD (Å) : 0.300 +/- 0.173

Consensus geometry

d (Å): 13

delta (°): 45-90

theta (°): 135-180

rho (°): 225-270

Consensus Sequence:	XXIDppRHH
(φψ)-conformation:	aappaaabb

Pattern:	[S]	[HY]	[A]	[HQ]	[K]	[K]	[G]	[AS]	[AIT]	[I]	[D]	[KR]	[KQ]	[R]	[H]	[H]	[V]	[L]	[KQ]	[AT]
Conservation:	-0.174	0.239	-0.174	-0.687	0.394	0.394	0.962	-1.010	-1.877	-0.174	0.962	-0.450	-0.731	0.394	2.097	2.097	-0.174	-0.174	-0.731	-1.182

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1akz_*_247	1akz	-	247	266	SYAQKKGSAIDRKRHHVLQT	HHHHHHGGGS-TTTSEEEEE	aaaaaaaaaxxaaabxbbbb
1okb_A_247	1okb	A	247	266	SYAHKKGATIDRKRHHVLQA	HHHHHHGGGS-TTTSEEEEE	aaaaaaaaaxxaaabbbbbb
3eug_A_166	3eug	A	166	185	SHAQKKGAIIDKQRHHVLKA	HHHHHHTTTS-TTTSEEEEE	aaaaaaaaaxxaaabbbbbb

Clusters included in this Subclass

CLUSTER: HE.8.48