Information on SUBCLASS 5.13.4 |
Subclass Accession number: 5782
Subclass: 5.13.4 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : - (>75 %) 22 (>50 %) 3 (>75 %) 4 (>50 %) GO : GO:0004175 (>50 %) GO:0004197 (>50 %) GO:0008233 (>50 %) GO:0008234 (>50 %) SCOP : 52128 (>50 %) 52129 (>50 %) 52130 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 11.5 +/- 13.1 Average RMSD (Å) : 0.933 +/- 0.404 Consensus geometry
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Consensus Sequence: | XpXcppchX |
(φψ)-conformation: | aappaaaba |
Pattern: | [CDS] | x | [EKS] | [IMV] | [KNQ] | [DKS] | [AFL] | [IL] | [EKQ] | x | [AT] | [AS] | [EN] | x | [DN] | [HK] | [EST] | [DKN] | [AY] | [ADE] | [CP] | [FL] | [ALY] | [CIV] | [AGI] | [ILV] |
Conservation: | -0.760 | -1.223 | -0.182 | 0.628 | 0.050 | -0.529 | -1.107 | 1.196 | 0.628 | -1.570 | 0.400 | 0.727 | 0.929 | -1.338 | 1.842 | 1.641 | -0.413 | -0.066 | -0.330 | -0.529 | 1.387 | 0.502 | -1.223 | 0.165 | -1.570 | 0.744 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1e4e_A_17 | 1e4e | A | 18 | 43 | DVSVKSAIEIAANINKEKYEPLYIGI | HHHHHHHHHHHHHS-TTTEEEEEEEE | aaaaaaaaaaaaapxaaabbwbxbxb |
1f1j_A_116 | 1f1j | A | 116 | 141 | CAKMQDLLKKASEEDHTNAACFACIL | HHHHHHHHHHHHHS-GGGEEEEEEEE | aaaaaaaaaaaaaxxaaababbbbbb |
1m72_A_108 | 1m72 | A | 108 | 133 | SEEINKFIQQTAEMDHSDADCLLVAV | HHHHHHHHHHHHTS--TTEEEEEEEE | aaaaaaaaaaaaaxxaaababbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1e4e_A_17 | 1e4e | A | PHY1(S)-AMINOETHYL-(2-CARBOXYPROPYL)PHOSPHORYL-PHOSPHINIC ACID | V - 19 |
1e4e_A_17 | 1e4e | A | PHY1(S)-AMINOETHYL-(2-CARBOXYPROPYL)PHOSPHORYL-PHOSPHINIC ACID | S - 23 |
1e4e_A_17 | 1e4e | A | GOLGLYCEROL | E - 34 |
1e4e_A_17 | 1e4e | A | GOLGLYCEROL | E - 37 |
1e4e_A_17 | 1e4e | A | GOLGLYCEROL | L - 39 |
1m72_A_108 | 1m72 | A | ASKDEHYDROXYMETHYLASPARTIC ACID | L - 134 |
Clusters included in this Subclass |
CLUSTER: HE.5.298 |