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Information on SUBCLASS 5.13.4
Subclass Accession number: 5782
Subclass: 5.13.4 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : - (>75 %)  22 (>50 %)  3 (>75 %)  4 (>50 %)  
GO : GO:0004175 (>50 %)  GO:0004197 (>50 %)  GO:0008233 (>50 %)  GO:0008234 (>50 %)  
SCOP : 52128 (>50 %)  52129 (>50 %)  52130 (>50 %)  
Number of loops: 3

Average sequence ID (%) : 11.5 +/- 13.1
Average RMSD (Å) : 0.933 +/- 0.404

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: XpXcppchX
(φψ)-conformation: aappaaaba
Pattern: [CDS]x[EKS][IMV][KNQ][DKS][AFL][IL][EKQ]x[AT][AS][EN]x[DN][HK][EST][DKN][AY][ADE][CP][FL][ALY][CIV][AGI][ILV]
Conservation:-0.760-1.223-0.1820.6280.050-0.529-1.1071.1960.628-1.5700.4000.7270.929-1.3381.8421.641-0.413-0.066-0.330-0.5291.3870.502-1.2230.165-1.5700.744
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1e4e_A_171e4e   A1843DVSVKSAIEIAANINKEKYEPLYIGIHHHHHHHHHHHHHS-TTTEEEEEEEEaaaaaaaaaaaaapxaaabbwbxbxb
1f1j_A_1161f1j   A116141CAKMQDLLKKASEEDHTNAACFACILHHHHHHHHHHHHHS-GGGEEEEEEEEaaaaaaaaaaaaaxxaaababbbbbb
1m72_A_1081m72   A108133SEEINKFIQQTAEMDHSDADCLLVAVHHHHHHHHHHHHTS--TTEEEEEEEEaaaaaaaaaaaaaxxaaababbbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1e4e_A_171e4e   A     PHY1(S)-AMINOETHYL-(2-CARBOXYPROPYL)PHOSPHORYL-PHOSPHINIC ACID V - 19
1e4e_A_171e4e   A     PHY1(S)-AMINOETHYL-(2-CARBOXYPROPYL)PHOSPHORYL-PHOSPHINIC ACID S - 23
1e4e_A_171e4e   A     GOLGLYCEROL E - 34
1e4e_A_171e4e   A     GOLGLYCEROL E - 37
1e4e_A_171e4e   A     GOLGLYCEROL L - 39
1m72_A_1081m72   A     ASKDEHYDROXYMETHYLASPARTIC ACID L - 134

Clusters included in this Subclass
CLUSTER: HE.5.298