Information on SUBCLASS 5.15.3 |
Subclass Accession number: 5786
Subclass: 5.15.3 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 17.6 +/- 17.6 Average RMSD (Å) : 0.967 +/- 0.208 Consensus geometry
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Consensus Sequence: | XXLXXcXXh |
(φψ)-conformation: | aapbplpbb |
Pattern: | [AIY] | x | [ES] | [EWY] | [IL] | [ENR] | [DPR] | x | [L] | [KL] | [KP] | [DG] | [AT] | x | [GIL] | [ALT] | x |
Conservation: | -0.842 | -1.042 | 0.756 | 0.161 | 1.245 | 0.061 | -0.741 | -0.240 | 2.066 | -0.081 | 1.272 | 0.942 | 0.513 | -0.942 | -1.343 | -0.641 | -1.142 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1l5j_A_479 | 1l5j | A | 479 | 495 | IHSWLNRMLLPDTVGTG | HHHHHGGG--TT-EEEE | aaaaaaaaxbplbbbbb |
1np3_A_82 | 1np3 | A | 89 | 105 | YKEEIEPNLKKGATLAF | HHHHTGGG--TT-EEEE | aaaaaaaaxxpvxbbbb |
1r18_A_62 | 1r18 | A | 68 | 84 | ALEYLRDHLKPGARILD | HHHHTTTT--TT-EEEE | aaaaaaaaxbpvxbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1l5j_A_479 | 1l5j | A | F3SFE3-S4 CLUSTER | I - 479 |
1l5j_A_479 | 1l5j | A | F3SFE3-S4 CLUSTER | H - 480 |
1r18_A_62 | 1r18 | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | H - 65 |
1r18_A_62 | 1r18 | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | D - 84 |
1r18_A_62 | 1r18 | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | V - 85 |
Clusters included in this Subclass |
CLUSTER: HE.8.39 |