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Information on SUBCLASS 5.15.3
Subclass Accession number: 5786
Subclass: 5.15.3 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 17.6 +/- 17.6
Average RMSD (Å) : 0.967 +/- 0.208

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 90-135 rho (°): 225-270
Consensus Sequence: XXLXXcXXh
(φψ)-conformation: aapbplpbb
Pattern: [AIY]x[ES][EWY][IL][ENR][DPR]x[L][KL][KP][DG][AT]x[GIL][ALT]x
Conservation:-0.842-1.0420.7560.1611.2450.061-0.741-0.2402.066-0.0811.2720.9420.513-0.942-1.343-0.641-1.142
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1l5j_A_4791l5j   A479495IHSWLNRMLLPDTVGTGHHHHHGGG--TT-EEEEaaaaaaaaxbplbbbbb
1np3_A_821np3   A89105YKEEIEPNLKKGATLAFHHHHTGGG--TT-EEEEaaaaaaaaxxpvxbbbb
1r18_A_621r18   A6884ALEYLRDHLKPGARILDHHHHTTTT--TT-EEEEaaaaaaaaxbpvxbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1l5j_A_4791l5j   A     F3SFE3-S4 CLUSTER I - 479
1l5j_A_4791l5j   A     F3SFE3-S4 CLUSTER H - 480
1r18_A_621r18   A     SAHS-ADENOSYL-L-HOMOCYSTEINE H - 65
1r18_A_621r18   A     SAHS-ADENOSYL-L-HOMOCYSTEINE D - 84
1r18_A_621r18   A     SAHS-ADENOSYL-L-HOMOCYSTEINE V - 85

Clusters included in this Subclass
CLUSTER: HE.8.39