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Information on SUBCLASS 5.22.1
Subclass Accession number: 5795
Subclass: 5.22.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 47.8 +/- 21.6
Average RMSD (Å) : 0.225 +/- 0.050

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XXGphGEXY
(φψ)-conformation: aappplpbb
Pattern: [TV][DEN][D][H][ACS][RT][AG][ILV]x[ACLM][IV][ALV][AT][EGKT][G][KR][AMV][G][E][IT][Y]x[I]
Conservation:-0.430-0.3351.3032.250-0.651-0.470-0.283-0.292-0.945-1.0040.140-0.876-0.303-1.3301.3030.129-0.8781.3030.830-0.5181.777-1.0770.357
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bxk_A_2291bxk   A229251VEDHARALYCVATTGKVGETYNIHHHHHHHHHHHHHH--TT-EEEEaaaaaaaaaaaaaaxxpvxbbxb
1kew_A_2361kew   A236258VEDHARALHMVVTEGKAGETYNIHHHHHHHHHHHHHH--TT-EEEEaaaaaaaaaaaaaaxxpvxbbxb
1oc2_A_2301oc2   A230252TNDHSTGVWAILTKGRMGETYLIHHHHHHHHHHHHHH--TT-EEEEaaaaaaaaaaaaaaxxpvxbbxb
1r6d_A_2201r6d   A220242TDDHCRGIALVLAGGRAGEIYHIHHHHHHHHHHHHHH--TT-EEEEaaaaaaaaaaaaaaxbpvxbbxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bxk_A_2291bxk   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE H - 232
1kew_A_2361kew   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE H - 239
1kew_A_2361kew   A     GOLGLYCEROL G - 253
1kew_A_2361kew   A     GOLGLYCEROL E - 254
1kew_A_2361kew   A     GOLGLYCEROL T - 255
1kew_A_2361kew   A     GOLGLYCEROL Y - 256
1oc2_A_2301oc2   A     NAHNICOTINAMIDE-ADENINE-DINUCLEOTIDE H - 233
1r6d_A_2201r6d   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE H - 223

Clusters included in this Subclass
CLUSTER: HE.6.166