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Information on SUBCLASS 5.32.1
Subclass Accession number: 5811
Subclass: 5.32.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 30.9 +/- 22.8
Average RMSD (Å) : 0.500 +/- 0.071

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 45-90 rho (°): 0-45
Consensus Sequence: hppGcXppL
(φψ)-conformation: aabepaabb
Pattern: [ILPV][AEGN][aegs][IL][IKV][ACDGN][ITV][FY][EHQ][EKQ][Y][AS][AGLV][kr][CEK][G][DHN]x[DHNY][AKQT][LV]x
Conservation:-0.605-0.746-1.1600.466-0.358-1.033-0.0381.4350.4100.2842.5550.187-1.014-0.483-0.6172.0270.202-1.024-0.141-0.6850.340-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1e8a_A_21e8a   A727LEGIVNIFHQYSVRKGHFDTL.HHHHHHHHHHHHTSSSSTTEE.aaaaaaaaaaaaaabepaabx.
1ig5_A_31ig5   A324PEELKGIFEKYAAKEGDPNQLSHHHHHHHHHHHHTTSS-TT-EEaaaaaaaaaaaaaabexaabbx
1k8u_A_51k8u   A930IGLLVAIFHKYSGREGDKHTLSHHHHHHHHHHHHTSSS-TTEEEaaaaaaaaaaaaaabexaabbx
1kso_A_41kso   A930VAAIVCTFQEYAGRCGDKYKLCHHHHHHHHHHHHTSSS-TT-EEaaaaaaaaaaaaaabexaabbb
1mr8_A_41mr8   A930LNSIIDVYHKYSLIKGNFHAVYHHHHHHHHHHHHTSSSSTT-EEaaaaaaaaaaaaaabexaabbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1e8a_A_21e8a   A     CACALCIUM ION Y - 17
1e8a_A_21e8a   A     CACALCIUM ION S - 18
1e8a_A_21e8a   A     CACALCIUM ION V - 19
1e8a_A_21e8a   A     CACALCIUM ION R - 20
1e8a_A_21e8a   A     CACALCIUM ION K - 21
1e8a_A_21e8a   A     CACALCIUM ION G - 22
1e8a_A_21e8a   A     CACALCIUM ION H - 23
1e8a_A_21e8a   A     CACALCIUM ION F - 24
1e8a_A_21e8a   A     CACALCIUM ION D - 25
1e8a_A_21e8a   A     CACALCIUM ION T - 26
1e8a_A_21e8a   A     CACALCIUM ION L - 27
1ig5_A_31ig5   A     MGMAGNESIUM ION Q - 22
1k8u_A_51k8u   A     MSESELENOMETHIONINE L - 5
1k8u_A_51k8u   A     MSESELENOMETHIONINE D - 6
1k8u_A_51k8u   A     MSESELENOMETHIONINE Q - 7
1k8u_A_51k8u   A     MSESELENOMETHIONINE A - 8
1mr8_A_41mr8   A     OC1CALCIUM ION, 1 WATER COORDINATED Y - 19
1mr8_A_41mr8   A     OC1CALCIUM ION, 1 WATER COORDINATED S - 20
1mr8_A_41mr8   A     OC1CALCIUM ION, 1 WATER COORDINATED L - 21
1mr8_A_41mr8   A     OC1CALCIUM ION, 1 WATER COORDINATED I - 22
1mr8_A_41mr8   A     OC1CALCIUM ION, 1 WATER COORDINATED K - 23
1mr8_A_41mr8   A     OC1CALCIUM ION, 1 WATER COORDINATED G - 24
1mr8_A_41mr8   A     OC1CALCIUM ION, 1 WATER COORDINATED N - 25
1mr8_A_41mr8   A     OC1CALCIUM ION, 1 WATER COORDINATED F - 26
1mr8_A_41mr8   A     OC1CALCIUM ION, 1 WATER COORDINATED H - 27
1mr8_A_41mr8   A     OC1CALCIUM ION, 1 WATER COORDINATED A - 28
1mr8_A_41mr8   A     OC1CALCIUM ION, 1 WATER COORDINATED V - 29
1mr8_A_41mr8   A     OC1CALCIUM ION, 1 WATER COORDINATED Y - 30
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1mr8_A_41mr8   A EF1CALCIUM BINDING SITE IN EF HANDS - 20
1mr8_A_41mr8   A EF1CALCIUM BINDING SITE IN EF HANDK - 23
1mr8_A_41mr8   A EF1CALCIUM BINDING SITE IN EF HANDN - 25
1mr8_A_41mr8   A EF1CALCIUM BINDING SITE IN EF HANDA - 28

Clusters included in this Subclass
CLUSTER: HE.7.32