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Information on SUBCLASS 5.46.1
Subclass Accession number: 5825
Subclass: 5.46.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.1 (>75 %)  2.1.1 (>75 %)  2.1.1.724.99 (>50 %)  4.99.1 (>50 %)  4.99.1.1
GO : GO:0003677 (>75 %)  GO:0004325 (>50 %)  GO:0008168 (>75 %)  GO:0008170 (>75 %)  GO:0008477 (>75 %)  GO:0008757 (>75 %)  GO:0009008 (>75 %)  GO:0016741 (>75 %)  GO:0016798 (>75 %)  GO:0016799 (>75 %)  
SCOP : 53334 (>75 %)  53335 (>75 %)  53377 (>75 %)  53589 (>75 %)  53590 (>75 %)  53591 (>75 %)  53799 (>50 %)  53800 (>50 %)  53801 (>50 %)  
 Number of loops: 4

Average sequence ID (%) : 34.3 +/- 31.9
Average RMSD (Å) : 1.025 +/- 0.126

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: XpXXXcphp
(φψ)-conformation: aappplaba
Pattern: [CI][FIL][D][FLT][ILV][am][KQS][HLV][EP][DNP][DK][ST][IV][QT][L][AIV][IPV]
Conservation:0.794-0.2462.668-0.9740.199-1.460-0.420-1.2160.130-0.4970.0410.2790.862-0.1531.211-0.392-0.827
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ezr_A_1051ezr   A109125IIDLIMSHEPKTITLVPHHHHHHHS-SS-EEEEEaaaaaaaxxplaxbxbx
1g60_A_121g60   A1228CFDFLDQVENKSVQLAVHHHHHHHS-TT-EEEEEaaaaaaaxxxlababbb
1nw6_A_471nw6   A4763CLDTLAKLPDDSVQLIIHHHHHHTS-TT-EEEEEaaaaaaabxplababbx
2mas_A_1052mas   A109125IIDLVMSHEPKTITLVPHHHHHHHS-TT-EEEEEaaaaaaaxxplabbxbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1g60_A_121g60   A     SAMS-ADENOSYLMETHIONINE C - 12
1g60_A_121g60   A     SAMS-ADENOSYLMETHIONINE F - 13
1nw6_A_471nw6   A     SFGADENOSYL-ORNITHINE C - 47
1nw6_A_471nw6   A     SFGADENOSYL-ORNITHINE L - 48

Clusters included in this Subclass
CLUSTER: HE.5.220