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Information on SUBCLASS 5.61.1
Subclass Accession number: 5840
Subclass: 5.61.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 14 (>50 %)  
GO : GO:0004497 (>75 %)  
SCOP : 48263 (>75 %)  48264 (>75 %)  48265 (>75 %)  
Number of loops: 3

Average sequence ID (%) : 27.3 +/- 16.7
Average RMSD (Å) : 0.433 +/- 0.058

Consensus geometry
d (Å): 15 delta (°): 45-90 theta (°): 45-90 rho (°): 90-135
Consensus Sequence: RhpXPXXXX
(φψ)-conformation: aabpababb
Pattern: [LWY]x[AKN][AV][ILV][EK][E][AT][L][R][FLY][HS][PT][P][LTV]xx[LTV][LMV]xx[AFT]
Conservation:-0.093-1.227-0.827-0.1350.1740.4651.5750.1090.9741.575-0.026-0.0970.3992.775-0.560-0.827-1.093-0.560-0.026-0.723-0.893-0.960
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1gwi_A_2751gwi   A275296WSAVVEETLRFSTPTSHVLIRFHHHHHHHHHHHS-SB--EEEEEaaaaaaaaaaabpababbxwbb
1h5z_A_3051h5z   A307328LENVLKETLRLHPPLIILMRVAHHHHHHHHHHHS-S---EEEEEaaaaaaaaaaabxababbbbbx
1io7_A_2401io7   A240261YLKAIEEALRYSPPVMRTVRKTHHHHHHHHHHHS-SB--EEEEEaaaaaaaaaaabxababbbbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gwi_A_2751gwi   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 283
1gwi_A_2751gwi   A     HEMPROTOPORPHYRIN IX CONTAINING FE T - 287
1gwi_A_2751gwi   A     HEMPROTOPORPHYRIN IX CONTAINING FE P - 288
1gwi_A_2751gwi   A     HEMPROTOPORPHYRIN IX CONTAINING FE T - 289
1gwi_A_2751gwi   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 292
1gwi_A_2751gwi   A     HEMPROTOPORPHYRIN IX CONTAINING FE R - 295
1h5z_A_3051h5z   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 311
1h5z_A_3051h5z   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 315
1h5z_A_3051h5z   A     HEMPROTOPORPHYRIN IX CONTAINING FE P - 319
1h5z_A_3051h5z   A     HEMPROTOPORPHYRIN IX CONTAINING FE P - 320
1h5z_A_3051h5z   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 321
1h5z_A_3051h5z   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 324
1h5z_A_3051h5z   A     HEMPROTOPORPHYRIN IX CONTAINING FE M - 325
1h5z_A_3051h5z   A     HEMPROTOPORPHYRIN IX CONTAINING FE R - 326
1io7_A_2401io7   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 248
1io7_A_2401io7   A     HEMPROTOPORPHYRIN IX CONTAINING FE P - 252
1io7_A_2401io7   A     HEMPROTOPORPHYRIN IX CONTAINING FE P - 253
1io7_A_2401io7   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 254
1io7_A_2401io7   A     HEMPROTOPORPHYRIN IX CONTAINING FE T - 257
1io7_A_2401io7   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 258
1io7_A_2401io7   A     HEMPROTOPORPHYRIN IX CONTAINING FE R - 259
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gwi_A_2751gwi   A HEAHEM BINDING SITE FOR CHAIN AL - 283

Clusters included in this Subclass
CLUSTER: HE.5.342