Information on SUBCLASS 5.66.1 |
Subclass Accession number: 5845
Subclass: 5.66.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0003677 (>75 %) GO:0003684 (>75 %) SCOP : 48333 (>75 %) 48334 (>75 %) 48335 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 74.4 +/- -30.7 Average RMSD (Å) : 0.267 +/- 0.058 Consensus geometry
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Consensus Sequence: | RTGhXTLKV |
(φψ)-conformation: | aalpaapbb |
Pattern: | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x |
Conservation: | -0.956 | -1.108 | -1.566 | 1.789 | -0.956 | -2.023 | -0.956 | -0.041 | 0.569 | -1.718 | 0.569 | 0.569 | 0.569 | 0.569 | 0.569 | 0.569 | 1.179 | -0.651 | -0.804 | 0.569 | -0.041 | 0.569 | -0.041 | 1.179 | 0.416 | 1.179 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1e3m_A_443 | 1e3m | A | 443 | 468 | ATDYLERLEVRERERTGLDTLKVGFN | HHHHHHHHHHHHHHHHT-TT-EEEEE | aaaaaaaaaaaaaaaavxaapbbbbb |
1e3m_B_431 | 1e3m | B | 443 | 468 | ATDYLERLEVRERERTGLDTLKVGFN | HHHHHHHHHHHHHHHH--TT-EEEEE | aaaaaaaaaaaaaaaavxaaxbbbbb |
1ewq_A_406 | 1ewq | A | 418 | 443 | GVAYFLELEERERERTGIPTLKVGYN | HHHHHHHHHHHHHHHH--TT-EEEEE | aaaaaaaaaaaaaaaavxaapbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ewq_A_406 | 1ewq | A | MSESELENOMETHIONINE | Y - 421 |
1ewq_A_406 | 1ewq | A | MSESELENOMETHIONINE | F - 422 |
1ewq_A_406 | 1ewq | A | MSESELENOMETHIONINE | L - 425 |
1ewq_A_406 | 1ewq | A | MSESELENOMETHIONINE | V - 440 |
1ewq_A_406 | 1ewq | A | MSESELENOMETHIONINE | G - 441 |
Clusters included in this Subclass |
CLUSTER: HE.5.197 |