Information on SUBCLASS 6.1.4 |
Subclass Accession number: 5854
Subclass: 6.1.4 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1.6 (>75 %) 1.6.1 (>75 %) 1.6.1.23 (>75 %) GO : GO:0008746 (>75 %) GO:0016614 (>50 %) GO:0016616 (>50 %) GO:0016651 (>75 %) GO:0016652 (>75 %) SCOP : 52466 (>75 %) 52467 (>75 %) 52484 (>75 %) 56326 (>50 %) 56327 (>50 %) 56328 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 15.8 +/- 15.8 Average RMSD (Å) : 1.000 +/- 0.265 Consensus geometry
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Consensus Sequence: | XXcXXXXXhX |
(φψ)-conformation: | aalbpaaabb |
Pattern: | [DTY] | [FKL] | [MV] | [AL] | [E] | [KLV] | [KL] | [DG] | [IK] | [HPQ] | [PR] | [EGS] | x | [CLV] | [EHP] | x | [PVW] | x | x |
Conservation: | -0.756 | -0.848 | 1.198 | 0.108 | 2.819 | -0.664 | -0.174 | 1.003 | -0.552 | -0.023 | 0.868 | -0.298 | -0.573 | 0.069 | -0.023 | -1.214 | -0.939 | -1.000 | -1.000 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bu6_O_201 | 1bu6 | O | 201 | 217 | DKMLEVLDIPREMLPEV.. | HHHHHHHT--TTS--EE.. | aaaaaaavbpaaaxxxx.. |
1i0z_A_164 | 1i0z | A | 172 | 190 | YLMAEKLGIHPSSCHGWIL | HHHHHHHTS-GGG-B--EE | aaaaaaavbxaaabbbbbb |
2cmd_*_148 | 2cmd | - | 156 | 174 | TFVAELKGKQPGEVEVPVI | HHHHHHHT--GGG----EE | aaaaaaalxxaaabbbwbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1i0z_A_164 | 1i0z | A | NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE | L - 165 |
1i0z_A_164 | 1i0z | A | OXMOXAMIC ACID | L - 165 |
1i0z_A_164 | 1i0z | A | NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE | D - 166 |
1i0z_A_164 | 1i0z | A | OXMOXAMIC ACID | D - 166 |
1i0z_A_164 | 1i0z | A | NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE | R - 169 |
1i0z_A_164 | 1i0z | A | OXMOXAMIC ACID | R - 169 |
2cmd_*_148 | 2cmd | * | CITCITRIC ACID | L - 149 |
2cmd_*_148 | 2cmd | * | CITCITRIC ACID | D - 150 |
2cmd_*_148 | 2cmd | * | CITCITRIC ACID | R - 153 |
Clusters included in this Subclass |
CLUSTER: HE.9.61 |