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Information on SUBCLASS 6.2.2
Subclass Accession number: 5856
Subclass: 6.2.2 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 15

Average sequence ID (%) : 14.4 +/- 15.1
Average RMSD (Å) : 0.827 +/- 0.281

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: XXchpXXphh
(φψ)-conformation: aagppaaabb
Pattern: [agimpvy][adekn]x[acilmv]x[aekqrt]x[agnr][AFILVW][dknpqrs]x[adegkt][CDEKNQR][cilv]x[AFILV]
Conservation:-0.983-0.341-1.299-0.113-0.896-0.435-0.9722.2291.0520.063-0.419-0.0570.5060.556-0.6381.747
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aj2_*_1571aj2   -169184IARCEQAGIAKEKLLLHHHHHHHT--GGGEEEaaaaaaavbxaaaxbb
1c1y_B_781c1y   B8398MKALKVRGLQPECCAVHHHHHTTT--GGGEEEaaaaaaavbbaaabbb
1edq_A_4201edq   A424439VNALLAQGVKPGKIVVHHHHHHHT--GGGEEEaaaaaaagxxaaaxbx
1eye_A_1491eye   A161176VADAVAAGVDPARLVLHHHHHHTT--GGGEEEaaaaaaagxxaaaxbx
1f6y_A_1331f6y   A144159VAAADEFGLPMEDLYIHHHHHHHT--GGGEEEaaaaaaavxpaaabbx
1g5b_A_251g5b   A2944MNKLDTIGFDNKKDLLHHHHHHHT--TTT-EEaaaaaaavpbaaaxbb
1jlr_A_1711jlr   A177192IEVLLRLGVKEERIIFHHHHHHTT--GGGEEEaaaaaaagxxaaaxbx
1mfi_A_691mfi   A8196GLLSDRLHISPDRVYIHHHHHHH---GGGEEEaaaaaaavxxaaabbb
1mww_A_721mww   A8499SELEYKLGIRAHDVEIHHHHHHH---GGGEEEaaaaaaavxpaaabbb
1nnl_A_1131nnl   A117132EHVASKLNIPATNVFAHHHHHHTT--GGGEEEaaaaaaalxxaaabbb
1ofu_X_891ofu   X89104HEWLRRAGLNRERILLHHHHHHTT--TTSEEEaaaaaaavxxaaabbb
1qzm_A_5061qzm   A508523PKQIERNALKKGELTVHHHHHHTT--TTTEEEaaaaaaavbxaaabbb
2pth_*_712pth   -7590AAMASFFRINPDEILVHHHHHHHT--GGGEEEaaaaaaalbxaaabbb
3pro_C_1373pro   C141156VDFVALSGADSAQVRIHHHHHHHT--TTTEEEaaaaaaavxxaaabbx
8abp_*_1108abp   -122137YKEMQKRGWDVKESAVHHHHHHHT--GGGEEEaaaaaaavpxaaabbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1aj2_*_1571aj2   *     2PH[7,8-DIHYDRO-PTERIN-6-YL METHANYL]-PHOSPHONOPHOSPHATE D - 185
1eye_A_1491eye   A     PMMPTERIN-6-YL-METHYL-MONOPHOSPHATE D - 177
1jlr_A_1711jlr   A     PO4PHOSPHATE ION G - 171
1jlr_A_1711jlr   A     PO4PHOSPHATE ION S - 172
1jlr_A_1711jlr   A     PO4PHOSPHATE ION V - 173
1mfi_A_691mfi   A     FHC2-FLUORO-3-(4-HYDROXYPHENYL)-2E-PROPENEOATE Y - 95
1mfi_A_691mfi   A     FHC2-FLUORO-3-(4-HYDROXYPHENYL)-2E-PROPENEOATE I - 96
1mfi_A_691mfi   A     FHC2-FLUORO-3-(4-HYDROXYPHENYL)-2E-PROPENEOATE N - 97
1mfi_A_691mfi   A     FHC2-FLUORO-3-(4-HYDROXYPHENYL)-2E-PROPENEOATE Y - 99
1mww_A_721mww   A     GLUGLUTAMIC ACID E - 98

Clusters included in this Subclass
CLUSTER: HE.5.132
CLUSTER: HE.6.192
CLUSTER: HE.6.42
CLUSTER: HE.7.62