Information on SUBCLASS 6.2.2 |
Subclass Accession number: 5856
Subclass: 6.2.2 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 15 Average sequence ID (%) : 14.4 +/- 15.1 Average RMSD (Å) : 0.827 +/- 0.281 Consensus geometry
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Consensus Sequence: | XXchpXXphh |
(φψ)-conformation: | aagppaaabb |
Pattern: | [agimpvy] | [adekn] | x | [acilmv] | x | [aekqrt] | x | [agnr] | [AFILVW] | [dknpqrs] | x | [adegkt] | [CDEKNQR] | [cilv] | x | [AFILV] |
Conservation: | -0.983 | -0.341 | -1.299 | -0.113 | -0.896 | -0.435 | -0.972 | 2.229 | 1.052 | 0.063 | -0.419 | -0.057 | 0.506 | 0.556 | -0.638 | 1.747 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1aj2_*_157 | 1aj2 | - | 169 | 184 | IARCEQAGIAKEKLLL | HHHHHHHT--GGGEEE | aaaaaaavbxaaaxbb |
1c1y_B_78 | 1c1y | B | 83 | 98 | MKALKVRGLQPECCAV | HHHHHTTT--GGGEEE | aaaaaaavbbaaabbb |
1edq_A_420 | 1edq | A | 424 | 439 | VNALLAQGVKPGKIVV | HHHHHHHT--GGGEEE | aaaaaaagxxaaaxbx |
1eye_A_149 | 1eye | A | 161 | 176 | VADAVAAGVDPARLVL | HHHHHHTT--GGGEEE | aaaaaaagxxaaaxbx |
1f6y_A_133 | 1f6y | A | 144 | 159 | VAAADEFGLPMEDLYI | HHHHHHHT--GGGEEE | aaaaaaavxpaaabbx |
1g5b_A_25 | 1g5b | A | 29 | 44 | MNKLDTIGFDNKKDLL | HHHHHHHT--TTT-EE | aaaaaaavpbaaaxbb |
1jlr_A_171 | 1jlr | A | 177 | 192 | IEVLLRLGVKEERIIF | HHHHHHTT--GGGEEE | aaaaaaagxxaaaxbx |
1mfi_A_69 | 1mfi | A | 81 | 96 | GLLSDRLHISPDRVYI | HHHHHHH---GGGEEE | aaaaaaavxxaaabbb |
1mww_A_72 | 1mww | A | 84 | 99 | SELEYKLGIRAHDVEI | HHHHHHH---GGGEEE | aaaaaaavxpaaabbb |
1nnl_A_113 | 1nnl | A | 117 | 132 | EHVASKLNIPATNVFA | HHHHHHTT--GGGEEE | aaaaaaalxxaaabbb |
1ofu_X_89 | 1ofu | X | 89 | 104 | HEWLRRAGLNRERILL | HHHHHHTT--TTSEEE | aaaaaaavxxaaabbb |
1qzm_A_506 | 1qzm | A | 508 | 523 | PKQIERNALKKGELTV | HHHHHHTT--TTTEEE | aaaaaaavbxaaabbb |
2pth_*_71 | 2pth | - | 75 | 90 | AAMASFFRINPDEILV | HHHHHHHT--GGGEEE | aaaaaaalbxaaabbb |
3pro_C_137 | 3pro | C | 141 | 156 | VDFVALSGADSAQVRI | HHHHHHHT--TTTEEE | aaaaaaavxxaaabbx |
8abp_*_110 | 8abp | - | 122 | 137 | YKEMQKRGWDVKESAV | HHHHHHHT--GGGEEE | aaaaaaavpxaaabbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1aj2_*_157 | 1aj2 | * | 2PH[7,8-DIHYDRO-PTERIN-6-YL METHANYL]-PHOSPHONOPHOSPHATE | D - 185 |
1eye_A_149 | 1eye | A | PMMPTERIN-6-YL-METHYL-MONOPHOSPHATE | D - 177 |
1jlr_A_171 | 1jlr | A | PO4PHOSPHATE ION | G - 171 |
1jlr_A_171 | 1jlr | A | PO4PHOSPHATE ION | S - 172 |
1jlr_A_171 | 1jlr | A | PO4PHOSPHATE ION | V - 173 |
1mfi_A_69 | 1mfi | A | FHC2-FLUORO-3-(4-HYDROXYPHENYL)-2E-PROPENEOATE | Y - 95 |
1mfi_A_69 | 1mfi | A | FHC2-FLUORO-3-(4-HYDROXYPHENYL)-2E-PROPENEOATE | I - 96 |
1mfi_A_69 | 1mfi | A | FHC2-FLUORO-3-(4-HYDROXYPHENYL)-2E-PROPENEOATE | N - 97 |
1mfi_A_69 | 1mfi | A | FHC2-FLUORO-3-(4-HYDROXYPHENYL)-2E-PROPENEOATE | Y - 99 |
1mww_A_72 | 1mww | A | GLUGLUTAMIC ACID | E - 98 |
Clusters included in this Subclass |
CLUSTER: HE.5.132 |
CLUSTER: HE.6.192 |
CLUSTER: HE.6.42 |
CLUSTER: HE.7.62 |