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PDB code:

Information on SUBCLASS 6.2.5

Subclass Accession number: 5859 Subclass: 6.2.5 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates:

Number of loops: 5 Average sequence ID (%) : 16.4 +/- 16.3 Average RMSD (Å) : 1.140 +/- 0.089 Consensus geometry d (Å): 13 delta (°): 90-135 theta (°): 135-180 rho (°): 180-225

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1ez0_A_178	1ez0	A	183	204	IVAECIEQALKQEQLPQAIFTL	HHHHHHHHHHHHHT--GGGEEE	aaaaaaaaaaaaalbpaaabbb
1j5v_A_59	1j5v	A	59	80	PLGDAAAGHLRKFGVKTDYIAR	HHHHHHHHHHHHTT-B-TTEEE	aaaaaaaaaaaaagxxaaaxxb
1ky8_A_198	1ky8	A	198	219	LPAAMAVKALLDAGFPPDAIAL	HHHHHHHHHHHHHT--TTSEEE	aaaaaaaaaaaaagppaaabbb
1pjr_*_37	1pjr	-	40	61	VLTHRIAYLMAEKHVAPWNILA	HHHHHHHHHHHTT---GGGEEE	aaaaaaaaaaaaavxxaaabbb
1v1a_A_60	1v1a	A	60	81	ELGAMVEERLRAEGVDLTHFRR	HHHHHHHHHHHHHT-B-TTEEE	aaaaaaaaaaaaagxxaaabbx

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1j5v_A_59	1j5v	A	NINICKEL (II) ION	A - 63
1j5v_A_59	1j5v	A	NI3NICKEL (II) ION, 3 WATERS COORDINATED	A - 63
1j5v_A_59	1j5v	A	MSESELENOMETHIONINE	A - 64
1j5v_A_59	1j5v	A	NINICKEL (II) ION	G - 66
1j5v_A_59	1j5v	A	NI3NICKEL (II) ION, 3 WATERS COORDINATED	G - 66
1j5v_A_59	1j5v	A	NINICKEL (II) ION	H - 67
1j5v_A_59	1j5v	A	NI3NICKEL (II) ION, 3 WATERS COORDINATED	H - 67
1j5v_A_59	1j5v	A	NINICKEL (II) ION	L - 68
1j5v_A_59	1j5v	A	NI3NICKEL (II) ION, 3 WATERS COORDINATED	L - 68
1j5v_A_59	1j5v	A	NINICKEL (II) ION	K - 70
1j5v_A_59	1j5v	A	NI3NICKEL (II) ION, 3 WATERS COORDINATED	K - 70
1j5v_A_59	1j5v	A	NINICKEL (II) ION	F - 71
1j5v_A_59	1j5v	A	NI3NICKEL (II) ION, 3 WATERS COORDINATED	F - 71
1j5v_A_59	1j5v	A	2OFFERROUS ION, 2 WATERS COORDINATED	K - 74

Clusters included in this Subclass

CLUSTER: HE.5.339

CLUSTER: HE.7.65

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