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Information on SUBCLASS 6.2.6
Subclass Accession number: 5860
Subclass: 6.2.6 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 16.4 +/- 20.3
Average RMSD (Å) : 0.660 +/- 0.241

Consensus geometry
d (Å): 15 delta (°): 90-135 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: XXGVphpphX
(φψ)-conformation: aagppaaabb
Pattern: x[GNV]x[GILV][ackv]x[AMY][ILTV][AEL]xx[DG][IV][KPQR][LP][DEGK][KNQW][CIL][klv][FIPV][giv][cklt]
Conservation:-0.4170.290-0.615-0.343-0.846-0.6500.1700.638-0.379-0.658-1.2222.3952.5510.6300.5420.294-0.0940.927-1.034-0.569-0.912-0.696
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1edq_A_4201edq   A420441TVNGVNALLAQGVKPGKIVVGTHHHHHHHHHHHT--GGGEEEEEaaaaaaaaaaagxxaaaxbxxb
1gz3_A_1781gz3   A181202VGKLCLYTACAGIRPDQCLPVCHHHHHHHHHHH---GGGEEEEEaaaaaaaaaaavxpaaabbwbb
1kz1_A_291kz1   A3758KGAVETMIEKHDVKLENIDIESHHHHHHHHHHH---GGGEEEEEaaaaaaaaaaavxxaaabxbbb
1n3l_A_871n3l   A98119ENVIKAMLESIGVPLEKLKFIKHHHHHHHHHHHT---TTEEEEEaaaaaaaaaaavbwaaaxbbbx
1o0s_A_1941o0s   A197218VGKLALYVALGGVQPKWCLPVLHHHHHHHHHHH---GGGEEEEEaaaaaaaaaaavpxaaaxbwbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gz3_A_1781gz3   A     MNMANGANESE (II) ION I - 179
1gz3_A_1781gz3   A     OXLOXALATE ION K - 183
1gz3_A_1781gz3   A     MNMANGANESE (II) ION K - 183

Clusters included in this Subclass
CLUSTER: HE.5.226
CLUSTER: HE.7.111