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Information on SUBCLASS 6.12.1
Subclass Accession number: 5875
Subclass: 6.12.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 8.8 +/- 10.9
Average RMSD (Å) : 1.275 +/- 0.377

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: ppXXXXXXhX
(φψ)-conformation: aapabpppbb
Pattern: xx[EFQ][IY][GNQT]xxxx[EHS][KL][DKPS][EFH]xx[EKPT][IPVW]x[FVY]
Conservation:-0.494-1.4840.5662.179-0.197-0.890-0.0010.397-0.2961.5020.5700.0010.533-0.791-1.6820.001-1.187-0.0271.298
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1fpr_A_4291fpr   A435453LDQINQRQESLPHAGPIIVHHHHHHHHTTSTT---EEEaaaaaaaaaaxabxxpxxx
1hgx_A_501hgx   A5068VFFYTDLLKHLDFQLEPDYHHHHHHHHTT--S--EEEEaaaaaaaaaaxabxbbwbb
1jqe_A_1201jqe   A120138SSEYQSRMLEKKELQKWDFHHHHHHHHTTSSS---EEEaaaaaaaaaababxxxbab
1mv8_A_971mv8   A103121CREIGFAIREKSERHTVVVHHHHHHHHTT--S--EEEEaaaaaaaaaaxaxxbbbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1fpr_A_4291fpr   A     PTRO-PHOSPHOTYROSINE H - 454
1jqe_A_1201jqe   A     SAHS-ADENOSYL-L-HOMOCYSTEINE S - 120
1jqe_A_1201jqe   A     SAHS-ADENOSYL-L-HOMOCYSTEINE S - 121
1jqe_A_1201jqe   A     SAHS-ADENOSYL-L-HOMOCYSTEINE M - 141
1jqe_A_1201jqe   A     SAHS-ADENOSYL-L-HOMOCYSTEINE I - 142
1mv8_A_971mv8   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE Y - 98
1mv8_A_971mv8   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE T - 101
1mv8_A_971mv8   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE V - 102
1mv8_A_971mv8   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE E - 105

Clusters included in this Subclass
CLUSTER: HE.7.67