Information on SUBCLASS 6.12.1 |
Subclass Accession number: 5875
Subclass: 6.12.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 8.8 +/- 10.9 Average RMSD (Å) : 1.275 +/- 0.377 Consensus geometry
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Consensus Sequence: | ppXXXXXXhX |
(φψ)-conformation: | aapabpppbb |
Pattern: | x | x | [EFQ] | [IY] | [GNQT] | x | x | x | x | [EHS] | [KL] | [DKPS] | [EFH] | x | x | [EKPT] | [IPVW] | x | [FVY] |
Conservation: | -0.494 | -1.484 | 0.566 | 2.179 | -0.197 | -0.890 | -0.001 | 0.397 | -0.296 | 1.502 | 0.570 | 0.001 | 0.533 | -0.791 | -1.682 | 0.001 | -1.187 | -0.027 | 1.298 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1fpr_A_429 | 1fpr | A | 435 | 453 | LDQINQRQESLPHAGPIIV | HHHHHHHHTTSTT---EEE | aaaaaaaaaaxabxxpxxx |
1hgx_A_50 | 1hgx | A | 50 | 68 | VFFYTDLLKHLDFQLEPDY | HHHHHHHHTT--S--EEEE | aaaaaaaaaaxabxbbwbb |
1jqe_A_120 | 1jqe | A | 120 | 138 | SSEYQSRMLEKKELQKWDF | HHHHHHHHTTSSS---EEE | aaaaaaaaaababxxxbab |
1mv8_A_97 | 1mv8 | A | 103 | 121 | CREIGFAIREKSERHTVVV | HHHHHHHHTT--S--EEEE | aaaaaaaaaaxaxxbbbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1fpr_A_429 | 1fpr | A | PTRO-PHOSPHOTYROSINE | H - 454 |
1jqe_A_120 | 1jqe | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | S - 120 |
1jqe_A_120 | 1jqe | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | S - 121 |
1jqe_A_120 | 1jqe | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | M - 141 |
1jqe_A_120 | 1jqe | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | I - 142 |
1mv8_A_97 | 1mv8 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | Y - 98 |
1mv8_A_97 | 1mv8 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | T - 101 |
1mv8_A_97 | 1mv8 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | V - 102 |
1mv8_A_97 | 1mv8 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | E - 105 |
Clusters included in this Subclass |
CLUSTER: HE.7.67 |