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Information on SUBCLASS 6.15.1
Subclass Accession number: 5879
Subclass: 6.15.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 7

Average sequence ID (%) : 9.8 +/- 11.1
Average RMSD (Å) : 1.300 +/- 0.404

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XXXXXpXXhX
(φψ)-conformation: aappaappbb
Pattern: [aekl][ltwy][AEGQS]xx[dhnpst][ADPST][DENS]xx[AILV]xxxx
Conservation:-0.430-0.2730.3960.224-0.528-0.3310.0812.359-0.572-0.5861.543-1.553-0.330-1.000-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1fxk_A_351fxk   A4458ELSRAADDAEVYKSSHHHHS-TT--EEEEEaaaaxxaapxbbbxb
1jpz_A_1091jpz   A129140KWERLNADEHIE...HHHT--TT--EE...aaaaxxaabbbx...
1jql_B_931jql   B100113LTGLLHDDLLLIVR.HHHH--SS--EEEE.aaaapbaaxxxbxb.
1m2o_A_1341m2o   A147161SLSLLPPNALIGLITHHHTS-TT-EEEEEEaaaaxxaapxbbbbb
1nfz_A_211nfz   A2133KYAAHTADTRLHL..HHHH-STT---EE..aaaabbaapxxbx..
1p9r_A_2701p9r   A278292LQELNSSERNILTVEHHHH--TTS-BEEEEaaaaxbaabbbbbbb
1qde_A_711qde   A7993ALQRIDTSVKAPQALHHHH--TT--S--EEaaaaxxaaxxbpabb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1fxk_A_351fxk   A     MSESELENOMETHIONINE I - 35
1fxk_A_351fxk   A     MSESELENOMETHIONINE N - 36
1fxk_A_351fxk   A     MSESELENOMETHIONINE E - 37
1fxk_A_351fxk   A     MSESELENOMETHIONINE T - 38
1nfz_A_211nfz   A     EIP4-HYDROXY-3-METHYL BUTYL DIPHOSPHATE K - 21
1nfz_A_211nfz   A     MNMANGANESE (II) ION H - 25
1nfz_A_211nfz   A     EIP4-HYDROXY-3-METHYL BUTYL DIPHOSPHATE H - 25
1nfz_A_211nfz   A     MNMANGANESE (II) ION T - 29
1nfz_A_211nfz   A     MNMANGANESE (II) ION H - 32
1nfz_A_211nfz   A     MNMANGANESE (II) ION L - 33
1p9r_A_2701p9r   A     MSESELENOMETHIONINE S - 271
1p9r_A_2701p9r   A     MSESELENOMETHIONINE T - 273
1p9r_A_2701p9r   A     MSESELENOMETHIONINE L - 274
1p9r_A_2701p9r   A     MSESELENOMETHIONINE Y - 275
1p9r_A_2701p9r   A     MSESELENOMETHIONINE G - 277
1p9r_A_2701p9r   A     MSESELENOMETHIONINE L - 278
1p9r_A_2701p9r   A     MSESELENOMETHIONINE L - 281
1p9r_A_2701p9r   A     MSESELENOMETHIONINE I - 288
1p9r_A_2701p9r   A     MSESELENOMETHIONINE L - 289
1p9r_A_2701p9r   A     MSESELENOMETHIONINE T - 290
1p9r_A_2701p9r   A     MSESELENOMETHIONINE V - 291
1p9r_A_2701p9r   A     MSESELENOMETHIONINE E - 292

Clusters included in this Subclass
CLUSTER: HE.6.136
CLUSTER: HE.7.37
CLUSTER: HE.8.88