Information on SUBCLASS 6.16.1 |
Subclass Accession number: 5880
Subclass: 6.16.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 9.5 +/- 10.6 Average RMSD (Å) : 1.400 +/- 0.100 Consensus geometry
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Consensus Sequence: | XXXXXXhpXX |
(φψ)-conformation: | aapapppabb |
Pattern: | [EQY] | [STV] | x | [AIK] | [AIV] | x | [ER] | [IT] | x | [STV] | [AGQ] | x | [EG] | [DV] | [AKL] | [FP] | [DEN] | x | [IT] | [CIV] | [DPV] |
Conservation: | 0.472 | -0.059 | -1.122 | -1.122 | 0.605 | -1.919 | 1.755 | 0.738 | -0.856 | -0.059 | -0.325 | -0.458 | 1.229 | -0.236 | -0.856 | 0.818 | 1.534 | -0.989 | 0.702 | 1.003 | -0.856 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1e3j_A_226 | 1e3j | A | 226 | 246 | ESSIIERIRSAIGDLPNVTID | HHHHHHHHHHHSSS--SEEEE | aaaaaaaaaaabFxxxabbbx |
1e5d_A_202 | 1e5d | A | 204 | 224 | QTLKAIETLVGAGVAPEFICP | HHHHHHHHHHHTT---SEEEE | aaaaaaaaaaaxaxbxabbbx |
1j0a_A_166 | 1j0a | A | 167 | 187 | YVRAVGEIATQSEVKFDSIVV | HHHHHHHHHHH-----SEEEE | aaaaaaaaaaaxabxxabbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1j0a_A_166 | 1j0a | A | IOH2-PROPANOL, ISOPROPANOL | R - 169 |
1j0a_A_166 | 1j0a | A | PLPPYRIDOXAL-5'-PHOSPHATE | A - 188 |
1j0a_A_166 | 1j0a | A | PLPPYRIDOXAL-5'-PHOSPHATE | A - 189 |
Clusters included in this Subclass |
CLUSTER: HE.7.82 |