Logo
Information on SUBCLASS 6.17.1
Subclass Accession number: 5882
Subclass: 6.17.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 50.2 +/- 27.3
Average RMSD (Å) : 0.233 +/- 0.052

Consensus geometry
d (Å): 19 delta (°): 90-135 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XpchpGXcVX
(φψ)-conformation: aagbalplbb
Pattern: x[adk][alv][hqw]x[nqr][gn][fily][kt][g][as][gn][v][kv][av][ag][iv][ilv][d]
Conservation:-1.422-1.155-0.706-0.496-1.293-0.2980.475-0.473-0.2382.2280.0050.2950.938-0.540-0.231-0.0220.6160.0882.228
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bh6_A_131bh6   A1432DKVQAQGYKGANVKVGIIDHHHHHTT---TT-EEEEEEaaaaaavbavxvbxbbbxb
1gci_*_131gci   -1432PAAHNRGLTGSGVKVAVLDHHHHHTT-S-TT-EEEEEEaaaaaavbavpvbxbxbxb
1r0r_E_131r0r   E1432DKVQAQGFKGANVKVAVLDHHHHHHT-S-TT-EEEEEEaaaaaagbavpvbxbbxxb
1r64_A_1571r64   A157175LDLWYNNITGAGVVAAIVDHHHHHTT-S-TT-EEEEEEaaaaaavbavxvbbbbxxb
1s01_*_131s01   -1432PALHSQGYTGSNVKVAVIDHHHHHTT-S-TT-EEEEEEaaaaaavbavpvxxbxbxb
1sup_*_131sup   -1432PALHSQGYTGSNVKVAVIDHHHHHHT-S-TT-EEEEEEaaaaaavbavxvxxbbxxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bh6_A_131bh6   A     1BHN-BENZYLOXYCARBONYL-ALA-PRO-3-AMINO-4-PHENYL-BUTAN-2-OL D - 32
1r64_A_1571r64   A     NAGN-ACETYL-D-GLUCOSAMINE N - 162
1r64_A_1571r64   A     NAGN-ACETYL-D-GLUCOSAMINE N - 163
1r64_A_1571r64   A     NAGN-ACETYL-D-GLUCOSAMINE I - 164
1r64_A_1571r64   A     NAGN-ACETYL-D-GLUCOSAMINE T - 165
1r64_A_1571r64   A     NAGN-ACETYL-D-GLUCOSAMINE A - 167
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1bh6_A_131bh6   A ACTACTIVE SITE.D - 32

Clusters included in this Subclass
CLUSTER: HE.7.27