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Information on SUBCLASS 3.8.1
Subclass Accession number: 590
Subclass: 3.8.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 5.2 (>75 %)  5.2.1 (>75 %)  5.2.1.8
GO : GO:0003755 (>75 %)  GO:0016853 (>75 %)  GO:0016859 (>75 %)  
SCOP : 50890 (>75 %)  50891 (>75 %)  50892 (>75 %)  
 Number of loops: 11

Average sequence ID (%) : 16.9 +/- 15.9
Average RMSD (Å) : 0.382 +/- 0.087

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 90-135 rho (°): 270-315
Consensus Sequence: XXXXGhX
(φψ)-conformation: bbaaepb
Pattern: xxx[cdgnst][dekpq]x[G][gilpvy]x[agptv]
Conservation:-0.160-0.487-0.386-0.070-0.119-0.2832.801-0.545-0.559-0.191
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dki_A_1841dki   A187196QGVGKVGGHAEEEETTEEEEbbbbaaexbx
1gpe_A_2531gpe   A259268FKQTASGPQAEEEETTEEEEbbxbaaewbx
1iuh_A_1561iuh   A162171SELKPKGPVYEEE-SSSEEEbbxbaaewbx
1jj2_M_431jj2   M4857VTLGPNGDDTEE--TTS-EEbbxbaaepbx
1kv7_A_2541kv7   A256265VIASDGGLLPEEEETTEEEExabbaaexxa
1o6y_A_741o6y   A7988EAETPAGPLPEEE-SSSEEEbxxbaaewbw
1olt_A_3071olt   A307314.HRNFQGYT..EE-SS-EE..bbbaaexb.
1rlh_A_1081rlh   A112121VYKGERGNGVEEE-SSSEEEbbxbaaebbx
1sfe_*_241sfe   -2837VAESERGICAEEE-SSSEEEbbbxaaepab
1trb_*_2061trb   -210219VTGDQMGVTGEEE-SSSEEEbbbbaaexab
2hrv_A_1092hrv   A109118KLLCKHGVIGEEEETTEEEExbbbaaexab
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gpe_A_2531gpe   A     FADFLAVIN-ADENINE DINUCLEOTIDE M - 253
1gpe_A_2531gpe   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 254
1gpe_A_2531gpe   A     FADFLAVIN-ADENINE DINUCLEOTIDE G - 255
1o6y_A_741o6y   A     ACPPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER M - 92
1o6y_A_741o6y   A     ACPPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER E - 93
1olt_A_3071olt   A     SAMS-ADENOSYLMETHIONINE F - 310
1olt_A_3071olt   A     SAMS-ADENOSYLMETHIONINE Q - 311
1olt_A_3071olt   A     SAMS-ADENOSYLMETHIONINE G - 312
2hrv_A_1092hrv   A     ZNZINC ION C - 112
2hrv_A_1092hrv   A     ZNZINC ION K - 113
2hrv_A_1092hrv   A     ZNZINC ION H - 114
2hrv_A_1092hrv   A     ZNZINC ION G - 115
2hrv_A_1092hrv   A     ZNZINC ION I - 117
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1olt_A_3071olt   A AC3SAM BINDING SITE FOR CHAIN AF - 310

Clusters included in this Subclass
CLUSTER: HA.3.45
CLUSTER: HA.4.169
CLUSTER: HA.5.166