Information on SUBCLASS 6.38.1 |
Subclass Accession number: 5903
Subclass: 6.38.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 2.1 (>75 %) 2.1.3 (>75 %) 2.1.3.32.3 (>50 %) 2.3.1 (>50 %) GO : GO:0004585 (>50 %) GO:0008415 (>50 %) GO:0016597 (>50 %) GO:0016741 (>50 %) GO:0016743 (>50 %) GO:0016746 (>50 %) GO:0016747 (>50 %) GO:0043176 (>50 %) SCOP : 53670 (>75 %) 53671 (>75 %) 53672 (>75 %) 53900 (>50 %) 53901 (>50 %) 53902 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 13.7 +/- 14.8 Average RMSD (Å) : 0.800 +/- 0.173 Consensus geometry
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Consensus Sequence: | phXhXXphXh |
(φψ)-conformation: | aagppaapbb |
Pattern: | [IPV] | [ANT] | [ENR] | x | [AFL] | [ALV] | [KM] | [KNQ] | [AL] | [GQ] | [LV] | [HPR] | [PQ] | [DEN] | [AW] | x | [AFV] |
Conservation: | -0.777 | -0.777 | 0.070 | 0.004 | -1.285 | -0.607 | 0.783 | 0.409 | -0.042 | 0.843 | 1.358 | -0.607 | 2.043 | 1.256 | -0.099 | -1.285 | -1.285 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1hzp_A_248 | 1hzp | A | 250 | 266 | INELLVKNLQLRPDAVV | HHHHHHHHTT--TT-EE | aaaaaaaaavxxaaxxb |
1m3k_A_66 | 1m3k | A | 66 | 82 | PARQAAMKAGVPQEATA | HHHHHHHHTT--TTSEE | aaaaaaaaavxxaaxbb |
1uch_*_13 | 1uch | - | 15 | 31 | VTNQFLKQLGLHPNWQF | HHHHHHHHTTB-TTEEE | aaaaaaaaagxxaabbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1hzp_A_248 | 1hzp | A | GOLGLYCEROL | S - 248 |
1hzp_A_248 | 1hzp | A | DAOLAURIC ACID | R - 249 |
1hzp_A_248 | 1hzp | A | GOLGLYCEROL | R - 249 |
1hzp_A_248 | 1hzp | A | DAOLAURIC ACID | I - 250 |
1hzp_A_248 | 1hzp | A | GOLGLYCEROL | E - 252 |
1hzp_A_248 | 1hzp | A | GOLGLYCEROL | V - 255 |
1hzp_A_248 | 1hzp | A | GOLGLYCEROL | K - 256 |
1hzp_A_248 | 1hzp | A | GOLGLYCEROL | Q - 259 |
1hzp_A_248 | 1hzp | A | GOLGLYCEROL | L - 260 |
1hzp_A_248 | 1hzp | A | GOLGLYCEROL | R - 261 |
1hzp_A_248 | 1hzp | A | GOLGLYCEROL | P - 262 |
1hzp_A_248 | 1hzp | A | GOLGLYCEROL | D - 263 |
1hzp_A_248 | 1hzp | A | GOLGLYCEROL | V - 265 |
Clusters included in this Subclass |
CLUSTER: HE.7.179 |