Information on SUBCLASS 6.47.1 |
Subclass Accession number: 5912
Subclass: 6.47.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 5.6 +/- 11.1 Average RMSD (Å) : 1.200 +/- 0.100 Consensus geometry
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Consensus Sequence: | pXXppXXXXX |
(φψ)-conformation: | aababpppbb |
Pattern: | x | [LTV] | [CRT] | x | [AEL] | x | [KQR] | [KL] | [AR] | [DQS] | [ERT] | [DPR] | x | x | [HI] | x | [IKT] | x |
Conservation: | -1.024 | 0.614 | -0.041 | -1.024 | -1.024 | -0.696 | 2.252 | 0.995 | 1.664 | 0.942 | 0.287 | -0.205 | 0.123 | -1.024 | 0.413 | -0.369 | -0.860 | -1.024 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1fzq_A_30 | 1fzq | A | 30 | 47 | KTTLLKQLASEDISHITP | HHHHHHHH--S--EEEEE | aaaaaaaabapxxxbbba |
1gpj_A_244 | 1gpj | A | 246 | 263 | DVREALRKRDRRSPILII | HHHHHHHH-SS---EEEE | aaaaaaaaxabxbxbbbb |
1tgs_I_34 | 1tgs | I | 36 | 53 | VLCSENKKRQTPVLIQKS | HHHHHHHT-SS---EEEE | aaaaaaaababxxbxabx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1fzq_A_30 | 1fzq | A | GDPGUANOSINE-5'-DIPHOSPHATE | K - 30 |
1fzq_A_30 | 1fzq | A | GDPGUANOSINE-5'-DIPHOSPHATE | T - 31 |
1fzq_A_30 | 1fzq | A | GDPGUANOSINE-5'-DIPHOSPHATE | T - 32 |
1fzq_A_30 | 1fzq | A | GDPGUANOSINE-5'-DIPHOSPHATE | L - 33 |
Clusters included in this Subclass |
CLUSTER: HE.6.274 |