Information on SUBCLASS 6.49.1 |
Subclass Accession number: 5914
Subclass: 6.49.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1.1 (>75 %) 1.1.1 (>75 %) 1.1.1.1 GO : GO:0004022 (>75 %) GO:0008270 (>75 %) GO:0016614 (>75 %) GO:0016616 (>75 %) GO:0046914 (>75 %) SCOP : 51734 (>75 %) 51735 (>75 %) 51736 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 41.7 +/- 19.8 Average RMSD (Å) : 0.200 +/- 0.000 Consensus geometry
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Consensus Sequence: | pXXXXGWGXX |
(φψ)-conformation: | aapppgNpbb |
Pattern: | [AV] | [GKQ] | [TV] | [LM] | [KR] | [AN] | [A] | [LV] | [DE] | [ACS] | [CT] | [HLV] | [KL] | [G] | [W] | [G] | [SV] | [CS] | [TV] | [LV] |
Conservation: | -0.466 | -0.854 | -0.383 | 0.084 | 0.168 | -0.696 | 0.371 | -0.257 | 0.251 | -0.524 | 0.066 | -1.043 | -0.753 | 1.220 | 3.341 | 1.220 | -0.885 | -0.259 | -0.383 | -0.219 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cdo_A_273 | 1cdo | A | 273 | 292 | VGVMRNALESCLKGWGVSVL | HHHHHHHHHTB-TTT-EEEE | aaaaaaaaaaxxxgaxbbbx |
1e3i_A_276 | 1e3i | A | 276 | 295 | AQTLKAAVDCTVLGWGSCTV | HHHHHHHHHTB-TTT-EEEE | aaaaaaaaaaxxxgNpbbbx |
1m6h_A_271 | 1m6h | A | 271 | 290 | VKVMRAALEACHKGWGVSVV | HHHHHHHHHTB-TTT-EEEE | aaaaaaaaaaxxxgNxbbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1cdo_A_273 | 1cdo | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | V - 275 |
1cdo_A_273 | 1cdo | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | L - 292 |
1e3i_A_276 | 1e3i | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | Q - 277 |
1e3i_A_276 | 1e3i | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | T - 278 |
1e3i_A_276 | 1e3i | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | V - 295 |
1m6h_A_271 | 1m6h | A | PO4PHOSPHATE ION | V - 287 |
Clusters included in this Subclass |
CLUSTER: HE.6.231 |