Information on SUBCLASS 6.52.1 |
Subclass Accession number: 5917
Subclass: 6.52.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0004089 (>75 %) GO:0008270 (>75 %) GO:0016829 (>75 %) GO:0016835 (>75 %) GO:0016836 (>75 %) GO:0046914 (>75 %) SCOP : 53040 (>75 %) 53056 (>75 %) 53057 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 43.1 +/- 11.7 Average RMSD (Å) : 0.567 +/- 0.231 Consensus geometry
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Consensus Sequence: | hXchXhGEhF |
(φψ)-conformation: | aalpppgabb |
Pattern: | [AP] | [ENS] | [HQR] | [ILV] | [ILT] | [DGN] | [FL] | [EPQ] | [AP] | [G] | [E] | [ALV] | [F] | [V] | [HV] | [R] | [N] |
Conservation: | -0.668 | -0.781 | -0.585 | -0.325 | -1.041 | -0.715 | -0.481 | -0.781 | -0.258 | 1.627 | 1.041 | -1.106 | 1.627 | 0.456 | -0.676 | 1.041 | 1.627 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ddz_A_410 | 1ddz | A | 410 | 426 | ANQIINLPAGEVFVHRN | HHHHTT--TTSEEEEEE | aaaaalbppgabxbbbb |
1ekj_A_167 | 1ekj | A | 167 | 183 | PSHVLDFQPGEAFVVRN | HHHHS---TTSEEEEEE | aaaaalxbpgabxbbbb |
1i6p_A_49 | 1i6p | A | 49 | 65 | AERLTGLEPGELFVHRN | HHHHH---TTSEEEEEE | aaaaavxxpvabbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ekj_A_167 | 1ekj | A | CUCOPPER (II) ION | P - 167 |
1ekj_A_167 | 1ekj | A | CUCOPPER (II) ION | S - 168 |
1ekj_A_167 | 1ekj | A | ACTACETATE ION | F - 179 |
1ekj_A_167 | 1ekj | A | CUCOPPER (II) ION | V - 180 |
1ekj_A_167 | 1ekj | A | CUCOPPER (II) ION | R - 182 |
Clusters included in this Subclass |
CLUSTER: HE.6.214 |