Information on SUBCLASS 6.62.1 |
Subclass Accession number: 5927
Subclass: 6.62.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1.1 (>50 %) 1.1.1 (>50 %) 1.1.1.85 GO : GO:0003862 (>75 %) GO:0016614 (>75 %) GO:0016616 (>75 %) SCOP : 53658 (>75 %) 53659 (>75 %) 53660 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 55.0 +/- 1.7 Average RMSD (Å) : 0.200 +/- 0.000 Consensus geometry
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Consensus Sequence: | hpXPXpFDVh |
(φψ)-conformation: | aabaaababb |
Pattern: | [IV] | [D] | [AN] | [AM] | [AT] | [M] | [HQ] | [L] | [IV] | [KR] | [ADS] | [P] | [AS] | [QR] | [F] | [D] | [V] | [LV] | [LV] | [CT] |
Conservation: | -0.055 | 1.478 | -1.176 | -1.155 | -0.847 | 0.861 | -0.306 | 0.244 | -0.059 | -0.037 | -1.401 | 2.095 | -0.654 | -0.350 | 1.478 | 1.478 | 0.244 | -0.664 | -0.664 | -0.512 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a05_A_221 | 1a05 | A | 221 | 240 | VDNAAMQLIRAPAQFDVLLT | HHHHHHHHHH-GGG-SEEEE | aaaaaaaaaabaaaxabbxb |
1cnz_A_226 | 1cnz | A | 226 | 245 | IDNATMQLIKDPSQFDVLLC | HHHHHHHHHH-GGG-SEEEE | aaaaaaaaaabaaababxbb |
1xaa_*_216 | 1xaa | - | 216 | 235 | VDAMAMHLVRSPARFDVVVT | HHHHHHHHHH-GGG-SEEEE | aaaaaaaaaabaaababbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1a05_A_221 | 1a05 | A | IPM3-ISOPROPYLMALIC ACID | D - 222 |
1a05_A_221 | 1a05 | A | MGMAGNESIUM ION | D - 222 |
1cnz_A_226 | 1cnz | A | MNMANGANESE (II) ION | D - 227 |
Clusters included in this Subclass |
CLUSTER: HE.5.279 |