ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 6.64.1

Subclass Accession number: 5929
Subclass: 6.64.1

Type: HE alpha-beta
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 1.2 (>75 %)  1.2.99 (>75 %)  1.2.99.2
GO : GO:0016903 (>75 %)  GO:0018492 (>75 %)
SCOP : 56175 (>75 %)  56176 (>75 %)  56187 (>75 %)

Number of loops: 2

Average sequence ID (%) : 64.7 +/- 0.0
Average RMSD (Å) : 0.200 +/- 0.000

Consensus geometry

d (Å): 13

delta (°): 90-135

theta (°): 135-180

rho (°): 225-270

Consensus Sequence:	KXRhApPEHL
(φψ)-conformation:	aalabbpabb

Pattern:	[L]	[IL]	[P]	[IM]	[M]	[K]	[LT]	[R]	[FL]	[A]	[QT]	[P]	[E]	[H]	[L]	[IV]	[D]
Conservation:	-0.243	-0.793	1.408	-0.931	0.308	0.308	-1.481	0.308	-1.068	-0.243	-1.344	1.408	0.308	1.959	-0.243	-0.518	0.858

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1ffv_C_37	1ffv	C	37	53	LLPMMKLRFAQPEHLID	HHHHHHTTS---SEEEE	aaaaaaavabbxabbbx
1n62_C_37	1n62	C	37	53	LIPIMKTRLATPEHLVD	HHHHHHTTS---SEEEE	aaaaaaalabbxabbbx

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1ffv_C_37	1ffv	C	FADFLAVIN-ADENINE DINUCLEOTIDE	L - 37
1ffv_C_37	1ffv	C	FADFLAVIN-ADENINE DINUCLEOTIDE	L - 38
1ffv_C_37	1ffv	C	FADFLAVIN-ADENINE DINUCLEOTIDE	P - 39
1ffv_C_37	1ffv	C	FESFE2/S2 (INORGANIC) CLUSTER	K - 42
1n62_C_37	1n62	C	FADFLAVIN-ADENINE DINUCLEOTIDE	I - 38

Clusters included in this Subclass

CLUSTER: HE.6.310