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Information on SUBCLASS 7.5.1
Subclass Accession number: 5938
Subclass: 7.5.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 7

Average sequence ID (%) : 35.7 +/- 28.0
Average RMSD (Å) : 0.529 +/- 0.359

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 90-135 rho (°): 225-270
Consensus Sequence: phGXXcphpHh
(φψ)-conformation: aalaaaapabb
Pattern: [AV][AST][ACGV][ACLV][AEKN][kl][flwy][GN][ltv][AET][DKS][KNR][FIMV][DRS][h][AIV]
Conservation:0.6470.065-1.094-0.822-0.721-0.092-0.9391.883-1.386-0.5930.1750.7170.010-0.4672.1110.507
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
16pk_*_37616pk   -379394ASAAELSGEAKRMSHVHHHHHHTT-TTTSSEEaaaaaaavaaaaxabb
1gtk_A_1711gtk   A171186VAGLKRLGLESRIRAAHHHHHHTT-GGG-SEEaaaaaaavaaaaxabx
1hdi_A_3741hdi   A376391ATCCAKWNTEDNVSHVHHHHHHTT-TTTSSEEaaaaaaalaaaababb
1php_*_3511php   -354369AAAVEKFGLADKMDHIHHHHHHTT-GGGSSEEaaaaaaavaaaaxabb
1qpg_*_3711qpg   -374389ATVAKKYGVTDKISHVHHHHHHTT-GGGSSEEaaaaaaalaaaaxabb
1vjd_A_3741vjd   A376391ATCCAKWNTEDKVSHVHHHHHHTT-TTTSSEEaaaaaaalaaaababb
1vpe_*_3541vpe   -357372AAAVNKFGLEDKFSHVHHHHHHTT-GGGSSEEaaaaaaavaaaababb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
16pk_*_37616pk   *     BIS1,1,5,5-TETRAFLUOROPHOSPHOPENTYLPHOSPHONIC ACID ADENYLATE ESTER G - 376
16pk_*_37616pk   *     BIS1,1,5,5-TETRAFLUOROPHOSPHOPENTYLPHOSPHONIC ACID ADENYLATE ESTER D - 377
16pk_*_37616pk   *     BIS1,1,5,5-TETRAFLUOROPHOSPHOPENTYLPHOSPHONIC ACID ADENYLATE ESTER S - 378
1gtk_A_1711gtk   A     DPM3-{2-[4-(2-CARBOXY-ETHYL)-3-CARBOXYMETHYL-5H-PYRROL-2-YLMETHYL]-4-CARBOXYMETHYL-5-METHYL-2H-PYRROL-3-YL}-PROPIONIC ACID V - 171
1gtk_A_1711gtk   A     DPM3-{2-[4-(2-CARBOXY-ETHYL)-3-CARBOXYMETHYL-5H-PYRROL-2-YLMETHYL]-4-CARBOXYMETHYL-5-METHYL-2H-PYRROL-3-YL}-PROPIONIC ACID A - 172
1gtk_A_1711gtk   A     DPM3-{2-[4-(2-CARBOXY-ETHYL)-3-CARBOXYMETHYL-5H-PYRROL-2-YLMETHYL]-4-CARBOXYMETHYL-5-METHYL-2H-PYRROL-3-YL}-PROPIONIC ACID G - 173
1gtk_A_1711gtk   A     DPM3-{2-[4-(2-CARBOXY-ETHYL)-3-CARBOXYMETHYL-5H-PYRROL-2-YLMETHYL]-4-CARBOXYMETHYL-5-METHYL-2H-PYRROL-3-YL}-PROPIONIC ACID R - 176
1hdi_A_3741hdi   A     AMPADENOSINE MONOPHOSPHATE D - 374
1hdi_A_3741hdi   A     MGMAGNESIUM ION D - 374
1php_*_3511php   *     ADPADENOSINE-5'-DIPHOSPHATE G - 351
1php_*_3511php   *     MGMAGNESIUM ION G - 351
1php_*_3511php   *     ADPADENOSINE-5'-DIPHOSPHATE D - 352
1php_*_3511php   *     MGMAGNESIUM ION D - 352
1php_*_3511php   *     ADPADENOSINE-5'-DIPHOSPHATE S - 353
1php_*_3511php   *     MGMAGNESIUM ION S - 353
1php_*_3511php   *     ADPADENOSINE-5'-DIPHOSPHATE A - 354
1qpg_*_3711qpg   *     MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE G - 371
1qpg_*_3711qpg   *     MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE D - 372
1qpg_*_3711qpg   *     MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE T - 373
1qpg_*_3711qpg   *     MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE A - 374
1vjd_A_3741vjd   A     ATPADENOSINE-5'-TRIPHOSPHATE D - 374
1vjd_A_3741vjd   A     ATPADENOSINE-5'-TRIPHOSPHATE T - 375
1vjd_A_3741vjd   A     ATPADENOSINE-5'-TRIPHOSPHATE A - 376
1vpe_*_3541vpe   *     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER G - 354
1vpe_*_3541vpe   *     MGMAGNESIUM ION G - 354
1vpe_*_3541vpe   *     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER D - 355
1vpe_*_3541vpe   *     MGMAGNESIUM ION D - 355
1vpe_*_3541vpe   *     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER S - 356
1vpe_*_3541vpe   *     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER A - 357

Clusters included in this Subclass
CLUSTER: HE.7.18