Information on SUBCLASS 7.6.1 |
Subclass Accession number: 5939
Subclass: 7.6.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 3.7 +/- 5.2 Average RMSD (Å) : 0.733 +/- 0.208 Consensus geometry
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Consensus Sequence: | XXcXhpphpXh |
(φψ)-conformation: | aalaaaababb |
Pattern: | [AIV] | [EKQ] | [EGQ] | [IL] | [ADR] | [AKV] | x | [DG] | [KLT] | [ALY] | [DHK] | [KNT] | [CLV] | [DST] | x | [AIV] | x | [STY] |
Conservation: | 0.415 | 1.420 | -0.159 | 2.137 | -1.164 | -0.877 | -0.733 | 1.847 | -1.021 | -0.877 | -0.016 | 0.128 | 0.271 | 0.271 | -0.303 | 0.415 | -1.308 | -0.446 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1gpm_A_418 | 1gpm | A | 432 | 449 | IEELRKADLYDKVSQAFT | HHHHHHTT-GGGSSEEEE | aaaaaaalaaaababbbb |
1kfw_A_36 | 1kfw | A | 36 | 53 | AKQLDVSGTAKNLTHINY | HHHHHHTS-GGG-SEEEE | aaaaaaavaaaababbxx |
1vi9_A_57 | 1vi9 | A | 64 | 81 | VQGIAAIDKLHTCDAVLS | HHHHHHTT-GGG--EEEE | aaaaaaavaaaaxabbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1kfw_A_36 | 1kfw | A | GOLGLYCEROL | L - 39 |
1kfw_A_36 | 1kfw | A | GOLGLYCEROL | D - 40 |
1kfw_A_36 | 1kfw | A | GOLGLYCEROL | V - 41 |
1kfw_A_36 | 1kfw | A | GOLGLYCEROL | S - 42 |
1kfw_A_36 | 1kfw | A | GOLGLYCEROL | G - 43 |
1kfw_A_36 | 1kfw | A | GOLGLYCEROL | T - 44 |
1kfw_A_36 | 1kfw | A | GOLGLYCEROL | A - 45 |
1kfw_A_36 | 1kfw | A | GOLGLYCEROL | K - 46 |
1kfw_A_36 | 1kfw | A | GOLGLYCEROL | N - 47 |
1kfw_A_36 | 1kfw | A | GOLGLYCEROL | Y - 53 |
1kfw_A_36 | 1kfw | A | GOLGLYCEROL | F - 55 |
1kfw_A_36 | 1kfw | A | GOLGLYCEROL | G - 56 |
1vi9_A_57 | 1vi9 | A | MSESELENOMETHIONINE | P - 57 |
1vi9_A_57 | 1vi9 | A | MSESELENOMETHIONINE | S - 58 |
1vi9_A_57 | 1vi9 | A | MSESELENOMETHIONINE | H - 59 |
1vi9_A_57 | 1vi9 | A | CSD3-SULFINOALANINE | H - 59 |
1vi9_A_57 | 1vi9 | A | MSESELENOMETHIONINE | L - 60 |
1vi9_A_57 | 1vi9 | A | CSD3-SULFINOALANINE | I - 63 |
1vi9_A_57 | 1vi9 | A | MSESELENOMETHIONINE | T - 75 |
1vi9_A_57 | 1vi9 | A | MSESELENOMETHIONINE | D - 77 |
1vi9_A_57 | 1vi9 | A | MSESELENOMETHIONINE | L - 80 |
Clusters included in this Subclass |
CLUSTER: HE.7.183 |