Information on SUBCLASS 7.20.1 |
Subclass Accession number: 5954
Subclass: 7.20.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1.18 (>50 %) 1.18.6 (>50 %) 1.18.6.13.2 (>50 %) 3.2.1 (>50 %) 3.2.1.1 GO : GO:0016163 (>50 %) GO:0016730 (>50 %) GO:0016732 (>50 %) GO:0030151 (>50 %) GO:0046914 (>50 %) SCOP : 51445 (>50 %) 51446 (>50 %) 53799 (>50 %) 53807 (>50 %) 53816 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 19.6 +/- 25.6 Average RMSD (Å) : 0.667 +/- 0.208 Consensus geometry
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Consensus Sequence: | XXpXhhXcXph |
(φψ)-conformation: | aabaaaaapbb |
Pattern: | [DNV] | [ADK] | [AIM] | [IL] | [ADK] | [AK] | [HS] | [PS] | [AY] | [GL] | [AKR] | [DN] | [AST] | [EKT] | [MV] | [FY] | [IY] |
Conservation: | -1.222 | -1.123 | -0.726 | 0.903 | -1.123 | -0.237 | 0.175 | 0.616 | 0.191 | -0.991 | -0.428 | 1.532 | -0.131 | -0.528 | 0.615 | 2.440 | 0.038 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dqn_A_154 | 1dqn | A | 154 | 170 | VDAIKKHSALADTKMFY | HHHHHTSTTTTT--EEE | aaaaaaxaaaaaxxbbb |
1m1n_B_400 | 1m1n | B | 407 | 423 | DAILAASPYGKNATVYI | HHHHHTSGGGTT-EEEE | aaaaaabaaaaabbbbb |
1qgu_B_396 | 1qgu | B | 403 | 419 | NKMLDASPYGRDSEVFI | HHHHHHSTT-TT-EEEE | aaaaaabaaaaaxbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1qgu_B_396 | 1qgu | B | MO5MAGNESIUM ION, 5 WATERS COORDINATED | N - 403 |
1qgu_B_396 | 1qgu | B | MO5MAGNESIUM ION, 5 WATERS COORDINATED | L - 406 |
1qgu_B_396 | 1qgu | B | MO5MAGNESIUM ION, 5 WATERS COORDINATED | D - 407 |
1qgu_B_396 | 1qgu | B | MO5MAGNESIUM ION, 5 WATERS COORDINATED | A - 408 |
1qgu_B_396 | 1qgu | B | MO5MAGNESIUM ION, 5 WATERS COORDINATED | S - 409 |
1qgu_B_396 | 1qgu | B | MO5MAGNESIUM ION, 5 WATERS COORDINATED | G - 412 |
1qgu_B_396 | 1qgu | B | MO5MAGNESIUM ION, 5 WATERS COORDINATED | R - 413 |
1qgu_B_396 | 1qgu | B | MO5MAGNESIUM ION, 5 WATERS COORDINATED | D - 414 |
1qgu_B_396 | 1qgu | B | MO5MAGNESIUM ION, 5 WATERS COORDINATED | S - 415 |
1qgu_B_396 | 1qgu | B | EDO1,2-ETHANEDIOL | E - 416 |
1qgu_B_396 | 1qgu | B | EDO1,2-ETHANEDIOL | F - 418 |
1qgu_B_396 | 1qgu | B | EDO1,2-ETHANEDIOL | I - 419 |
Clusters included in this Subclass |
CLUSTER: HE.8.112 |