ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 8.15.1

Subclass Accession number: 5979
Subclass: 8.15.1

Type: HE alpha-beta
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : - (>50 %)  1 (>50 %)  1.14 (>50 %)  2 (>50 %)  7 (>50 %)
GO : GO:0004672 (>75 %)  GO:0005506 (>50 %)  GO:0016301 (>75 %)  GO:0016705 (>50 %)  GO:0016772 (>75 %)  GO:0016773 (>75 %)  GO:0046914 (>50 %)
SCOP : 51181 (>75 %)  51197 (>75 %)  51198 (>75 %)  56111 (>75 %)  56112 (>75 %)  88854 (>75 %)

Number of loops: 3

Average sequence ID (%) : 26.7 +/- 18.2
Average RMSD (Å) : 0.467 +/- 0.115

Consensus geometry

d (Å): 9

delta (°): 90-135

theta (°): 90-135

rho (°): 135-180

Consensus Sequence:	XhXGhXcIhphX
(φψ)-conformation:	aapgpplbppba

Pattern:	[IL]	[HKR]	x	[E]	x	[KR]	[IT]	[LY]	[EK]	x	[LM]	[AQR]	[G]	[CG]	[PTV]	[GN]	[I]	[IP]	[NT]	[ILV]	x	[DWY]	[CFI]	[GV]	[AKQ]
Conservation:	0.523	-0.071	-1.721	1.893	-1.250	0.912	-0.356	0.358	0.568	-0.936	0.630	-0.700	2.601	-0.064	-0.857	0.612	1.186	-0.305	0.351	0.243	-1.171	-0.543	-0.621	-0.581	-0.700

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1cki_A_52	1cki	A	52	76	LHIESKIYKMMQGGVGIPTIRWCGA	HHHHHHHHHHSTTSTT---EEEEEE	aaaaaaaaaaapgxxvbxxxabbeb
1csn_*_52	1csn	-	52	76	LRDEYRTYKLLAGCTGIPNVYYFGQ	HHHHHHHHHHTTT-TT---EEEEEE	aaaaaaaaaaapgxxvbxxbabbbb
1na7_A_75	1na7	A	78	102	IKREIKILENLRGGPNIITLADIVK	HHHHHHHHHHSTT-TTB--EEEEEE	aaaaaaaaaaapvxwvxpbxabbbx

PDB ligands within a cut-off distance of 6 Å in this subclass

Clusters included in this Subclass