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Information on SUBCLASS 10.3.1
Subclass Accession number: 5999
Subclass: 10.3.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.5 (>75 %)  1.5.1 (>75 %)  1.5.1.33.1 (>75 %)  3.1.1 (>75 %)  3.1.1.4 (>75 %)  
GO : GO:0004146 (>75 %)  GO:0005509 (>75 %)  GO:0016298 (>75 %)  GO:0016645 (>75 %)  GO:0016646 (>75 %)  GO:0016788 (>75 %)  GO:0016789 (>75 %)  
SCOP : 48618 (>75 %)  48619 (>75 %)  48623 (>75 %)  53596 (>75 %)  53597 (>75 %)  53598 (>75 %)  
 Number of loops: 7

Average sequence ID (%) : 62.8 +/- 25.4
Average RMSD (Å) : 0.714 +/- 0.495

Consensus geometry
d (Å): 21 delta (°): 90-135 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: GcXTGCXPKXpXYp
(φψ)-conformation: aapbgbbaaappbb
Pattern: [AR][CT][CD][QR][CT][CH][f][NV][CH][DY][CG][AC][GY][EG][GKR][SV][KRT][G][C][ADN][P][K][ilmw][ADR]x[Y][ST][FY][QS]x[DEKQS]
Conservation:-0.486-0.057-0.2970.1240.4400.198-0.480-0.8510.074-0.4190.0760.592-0.295-0.149-0.733-0.760-0.5521.4342.811-0.6941.8930.975-1.099-1.023-1.1891.8930.0141.081-0.274-1.571-0.681
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1jia_A_401jia   A4070ATDRCCFVHDCCYEKVTGCDPKWDDYTYSWKHHHHHHHHHHHHHHT--SS-TTTS---EEEEaaaaaaaaaaaaaaaxbgbxaaaxxbbbbbb
1jlt_B_401jlt   B4070ATDRCCFVHDCCYGRVRGCNPKLAIYSYSFKHHHHHHHHHHHHHHT--SS-TTT----EEEEaaaaaaaaaaaaaaaxbgbxaaaxbbxbbxb
1m8r_A_401m8r   A4070ATDRCCFVHDCCYGKVTGCDPKMDVYSFSEEHHHHHHHHHHHHHHT--SS-TTT---EEEEEaaaaaaaaaaaaaaaxbgbbaaaxxbbbbbb
1oqs_B_401oqs   B4070ATDRCCFVHDCCYGGVKGCNPKLAIYSYSFQHHHHHHHHHHHHHHT--SS-TTT----EEEEaaaaaaaaaaaaaaaxbvbbaaaxbbbbbbb
1ows_B_401ows   B4373RCCQTHDNCYGAGGGSTGCAPKSRTYTYQCSHHHHHHHHHHHHHHTSTT--TTT----EEEEaaaaaaaaaaaaaaaxpUxbaaaxxbbbbbb
1umv_X_391umv   X3969ATDRCCFVHDCCYGKVTGCNPKIDSYTYSKKHHHHHHHHHHHHHHT--SS-TTT----EEEEaaaaaaaaaaaaaaaxbgbbaaaxxbbbbbb
1vap_A_391vap   A3969ATDRCCFVHDCCYGKVTGCNPKMDIYTYSVDHHHHHHHHHHHHHHT--SS-TTT----EEEEaaaaaaaaaaaaaaaxbvbbaaaxxbbbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1jia_A_401jia   A     CACALCIUM ION C - 45
1jia_A_401jia   A     CACALCIUM ION D - 49
1jlt_B_401jlt   B     MPD2-METHYL-2,4-PENTANEDIOL C - 45
1jlt_B_401jlt   B     MPD2-METHYL-2,4-PENTANEDIOL H - 48
1jlt_B_401jlt   B     MPD2-METHYL-2,4-PENTANEDIOL D - 49
1jlt_B_401jlt   B     MPD2-METHYL-2,4-PENTANEDIOL Y - 52
1m8r_A_401m8r   A     CDCADMIUM ION C - 45
1m8r_A_401m8r   A     BU11,4-BUTANEDIOL C - 45
1m8r_A_401m8r   A     CDCADMIUM ION F - 46
1m8r_A_401m8r   A     BU11,4-BUTANEDIOL H - 48
1m8r_A_401m8r   A     CDCADMIUM ION D - 49
1m8r_A_401m8r   A     BU11,4-BUTANEDIOL D - 49
1umv_X_391umv   X     CACALCIUM ION C - 44
1umv_X_391umv   X     CACALCIUM ION F - 45
1umv_X_391umv   X     CACALCIUM ION D - 48
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1jia_A_401jia   A ATAACTIVE SITE.H - 48
1umv_X_391umv   X AC1CA BINDING SITE FOR CHAIN XD - 48

Clusters included in this Subclass
CLUSTER: HE.12.3
CLUSTER: HE.14.2