ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 26.1.1

Subclass Accession number: 6026
Subclass: 26.1.1

Type: HE alpha-beta
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Conserved Annotation
GO : GO:0001871 (>75 %) GO:0005102 (>75 %) GO:0005529 (>75 %) GO:0008061 (>75 %) GO:0008083 (>75 %) GO:0030246 (>75 %) GO:0030247 (>75 %)
SCOP : 57015 (>75 %) 57016 (>75 %) 57017 (>75 %)

Number of loops: 3

Average sequence ID (%) : 67.7 +/- -19.4
Average RMSD (Å) : 0.433 +/- 0.153

Consensus geometry

d (Å): 19

delta (°): 45-90

theta (°): 45-90

rho (°): 180-225

Consensus Sequence:	pCGpGCQSQCpYXRCGppFGGpXCppphCC
(φψ)-conformation:	aapplpablaaaabbeaaallpbppllppb

Pattern:	[DE]	[EGN]	[HY]	[C]	[G]	[EKQ]	[G]	[C]	[Q]	[S]	[Q]	[C]	[DS]	[Y]	[NW]	[R]	[C]	[G]	[KR]	[DE]	[F]	[G]	[G]	[KR]	[EL]	[C]	[EHT]	[DE]	[DE]	[LM]	[C]	[C]
Conservation:	-0.555	-1.494	-0.184	1.508	0.316	-1.053	0.316	1.508	-0.081	-0.479	-0.081	1.508	-0.984	0.713	-1.067	-0.081	1.508	0.316	-0.659	-0.555	0.316	0.316	0.316	-0.673	-1.776	1.508	-1.538	-0.590	-0.555	-0.755	1.508	1.508

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1uha_A_29	1uha	A	29	60	DNYCGQGCQSQCDYWRCGRDFGGRLCEEDMCC	HHHHSTT--B-TTTTB-BGGGTTB--STT-EE	aaaaFxvpablaaaabbeaaavvpxxxllxxb
1ulk_A_29	1ulk	A	29	60	EEYCGKGCQSQCDYNRCGKEFGGKECHDELCC	HHHHSTT--B-TTTTB-BGGGTTB--GGG-EE	aaaaxpvpablaaaabbeaaavvxbxxllxxb
1ulk_A_70	1ulk	A	70	101	DGHCGEGCQSQCSYWRCGKDFGGRLCTEDMCC	HHHHSTT--B-TTTTB-BGGGTTB--STT-EE	aaaaxpvpablaaaabbeaaaUvpbxxllxxb

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1uha_A_29	1uha	A	CACALCIUM ION	D - 57

Clusters included in this Subclass