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Information on SUBCLASS 2.2.6
Subclass Accession number: 6051
Subclass: 2.2.6 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 33

Average sequence ID (%) : 8.4 +/- 12.6
Average RMSD (Å) : 0.706 +/- 0.122

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: XpXpXX
(φψ)-conformation: abaabb
Pattern: xx[adegknrst][deknpr][cdehknrstwy]xxxx
Conservation:-0.208-0.7832.0191.290-0.670-0.065-0.411-0.200-0.972
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aqt_*_41aqt   -816VVSAEQQMFEEESS-EEEbbbaabbab
1bec_*_1791bec   -180188KESNYSYCLEEETTEEEExabaabbbb
1ee8_A_821ee8   A8694LVLEGRTLYEEESS-EEExxxaabbbb
1ej8_A_1001ej8   A108116QVGENKTLFEEETTEEEExabaabbxb
1g0u_I_1731g0u   I177185IIKKDEVVKEEESS-EEEbbbaabbbb
1gpi_A_1031gpi   A108114MADDTHY..EEETTEE..babaabx..
1h4u_A_3881h4u   A389397TGNGRQCVAEE-SS-EEEbebaabbbx
1h6d_A_3281h6d   A333341VQGDKAVLLEEESS-EEEbxbaabbbb
1htp_*_551htp   -5967VESVKATSDEEESS-EEEbbbaabbbx
1j19_A_51j19   A917VTTMDAELEEE-TT--EExbxaabbbx
1j1t_A_281j1t   A2836LVDDSTLVFEEETTEEEExabaabbbb
1j5w_A_1781j5w   A178184QWNENVK..EEETTEE..xabaabx..
1jdw_*_3631jdw   -364372MLDEKRVMVEEETTEEEExabaabbxb
1ji2_A_151ji2   A1725PISETQLRVEEETTEEEExabaabbxb
1k8k_D_1421k8k   D145153HYRDDETMYEEETTEEEExabaabbbb
1nhp_*_2251nhp   -226234VVTDKNAYDEEESS-EEEbbbaabbbx
1njh_A_651njh   A6977LKTEEGWIYEEESSSEEEbxxaabbbb
1nmo_A_1231nmo   A123131EIEPLVPWGEEETTEEEEbabaabxbe
1nrw_A_1001nrw   A103111VFTGSAIYTEEESS-EEEbxbaabbxb
1onl_A_551onl   A5967VESVKTASDEEESS-EEExbbaabbbx
1ouw_A_961ouw   A104112FTTNLKAHGEEESS-EEEbxbaabxbe
1q2b_A_1061q2b   A111117MASDTTY..EEETTEE..babaabx..
1qd6_C_2211qd6   C230238PITKHVRLYEEETTEEEExabaabbxb
1qj8_A_571qj8   A7280RINDWASIYEEETTEEEExabaabbbb
1qmh_A_2341qmh   A241249VESENITEREEESS-EEEbxbaabbbb
1qqg_A_831qqg   A8694LYTRDEHFAEEESS-EEEbbbaabbbb
1rkq_A_1781rkq   A183191KSAPYFLEIEEETTEEEExabaabbxb
1rxx_A_2821rxx   A285293FCDRDLVTVEEETTEEEExabaabbxb
1ry6_A_241ry6   A2634VKNNCTLYIEEETTEEEExabaabbbb
1s68_A_391s68   A4452IIERDKVTCEEESS-EEExxbaabbbx
1szw_A_3061szw   A312320WWDDVTVEIEEETTEEEExabaabbbb
1vhh_*_1731vhh   -176184YESKAHIHCEEETTEEEExabaabbxb
2cua_A_712cua   A7381QTGPNQYTVEEETTEEEExabaabbxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ej8_A_1001ej8   A     CACALCIUM ION V - 123
1htp_*_551htp   *     OSS6-(HYDROXYETHYLDITHIO)-8-(AMINOMETHYLTHIO)OCTANOIC ACID V - 59
1htp_*_551htp   *     OSS6-(HYDROXYETHYLDITHIO)-8-(AMINOMETHYLTHIO)OCTANOIC ACID S - 61
1htp_*_551htp   *     OSS6-(HYDROXYETHYLDITHIO)-8-(AMINOMETHYLTHIO)OCTANOIC ACID K - 63
1htp_*_551htp   *     OSS6-(HYDROXYETHYLDITHIO)-8-(AMINOMETHYLTHIO)OCTANOIC ACID A - 64
1htp_*_551htp   *     OSS6-(HYDROXYETHYLDITHIO)-8-(AMINOMETHYLTHIO)OCTANOIC ACID T - 65
1htp_*_551htp   *     OSS6-(HYDROXYETHYLDITHIO)-8-(AMINOMETHYLTHIO)OCTANOIC ACID S - 66
1htp_*_551htp   *     OSS6-(HYDROXYETHYLDITHIO)-8-(AMINOMETHYLTHIO)OCTANOIC ACID D - 67
1htp_*_551htp   *     OSS6-(HYDROXYETHYLDITHIO)-8-(AMINOMETHYLTHIO)OCTANOIC ACID V - 68
1htp_*_551htp   *     OSS6-(HYDROXYETHYLDITHIO)-8-(AMINOMETHYLTHIO)OCTANOIC ACID N - 69
1j5w_A_1781j5w   A     MSESELENOMETHIONINE Q - 178
1njh_A_651njh   A     IOH2-PROPANOL, ISOPROPANOL R - 66
1njh_A_651njh   A     GOLGLYCEROL R - 66
1njh_A_651njh   A     MSESELENOMETHIONINE V - 67
1njh_A_651njh   A     MSESELENOMETHIONINE L - 81
1nmo_A_1231nmo   A     MSESELENOMETHIONINE E - 123
1nmo_A_1231nmo   A     MSESELENOMETHIONINE W - 130
1nmo_A_1231nmo   A     MSESELENOMETHIONINE G - 131
1nmo_A_1231nmo   A     MSESELENOMETHIONINE E - 132
1nmo_A_1231nmo   A     MSESELENOMETHIONINE L - 133
1ouw_A_961ouw   A     EDO1,2-ETHANEDIOL N - 96
1ouw_A_961ouw   A     IMDIMIDAZOLE N - 96
1ouw_A_961ouw   A     EDO1,2-ETHANEDIOL V - 98
1qd6_C_2211qd6   C     HDS1-HEXADECANOSULFONIC ACID V - 235
1qj8_A_571qj8   A     PCLPLATINUM(II) DI-CHLORIDE N - 60
1qj8_A_571qj8   A     PCLPLATINUM(II) DI-CHLORIDE Q - 61
1qj8_A_571qj8   A     PCLPLATINUM(II) DI-CHLORIDE Y - 62
1qj8_A_571qj8   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE P - 69
1qj8_A_571qj8   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE A - 70
1qj8_A_571qj8   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE Y - 71
1qj8_A_571qj8   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE I - 79
1qj8_A_571qj8   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE Y - 80
1qj8_A_571qj8   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE G - 81
1qj8_A_571qj8   A     PCLPLATINUM(II) DI-CHLORIDE F - 90
1rkq_A_1781rkq   A     MO3MAGNESIUM ION, 3 WATERS COORDINATED K - 183
1rkq_A_1781rkq   A     MO3MAGNESIUM ION, 3 WATERS COORDINATED S - 184
1rkq_A_1781rkq   A     MO3MAGNESIUM ION, 3 WATERS COORDINATED A - 185
1rxx_A_2821rxx   A     MSESELENOMETHIONINE V - 282
1rxx_A_2821rxx   A     MSESELENOMETHIONINE F - 283
1rxx_A_2821rxx   A     MSESELENOMETHIONINE S - 284
1rxx_A_2821rxx   A     MSESELENOMETHIONINE F - 285
1s68_A_391s68   A     AMPADENOSINE MONOPHOSPHATE T - 39
1s68_A_391s68   A     AMPADENOSINE MONOPHOSPHATE N - 40
1s68_A_391s68   A     AMPADENOSINE MONOPHOSPHATE F - 41
1vhh_*_1731vhh   *     ZNZINC ION E - 177
1vhh_*_1731vhh   *     ZNZINC ION H - 181
1vhh_*_1731vhh   *     ZNZINC ION I - 182
1vhh_*_1731vhh   *     ZNZINC ION H - 183
1vhh_*_1731vhh   *     ZNZINC ION C - 184
2cua_A_712cua   A     CUADINUCLEAR COPPER ION F - 86

Clusters included in this Subclass
CLUSTER: HA.1.31
CLUSTER: HA.2.140
CLUSTER: HA.2.54
CLUSTER: HA.2.73
CLUSTER: HA.3.218
CLUSTER: HA.3.35
CLUSTER: HA.4.190
CLUSTER: HA.4.51