Information on SUBCLASS 2.2.12 |
Subclass Accession number: 6057
Subclass: 2.2.12 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 10 Average sequence ID (%) : 10.2 +/- 15.9 Average RMSD (Å) : 0.490 +/- 0.145 Consensus geometry
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Consensus Sequence: | XpppXX |
(φψ)-conformation: | bbaabb |
Pattern: | x | x | [aknst] | [EHNPS] | [deknqty] | x | [dgpqt] |
Conservation: | -1.000 | 1.259 | 0.342 | 0.972 | -0.554 | -1.076 | -0.943 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cb8_A_601 | 1cb8 | A | 604 | 610 | ANTNQLQ | EESSSEE | bbbaabb |
1chm_A_329 | 1chm | A | 329 | 334 | .LSHYYG | .EETTEE | .bbaabe |
1cxy_A_19 | 1cxy | A | 19 | 24 | .HSPDDC | .EETTEE | .abaabb |
1cyo_*_16 | 1cyo | - | 16 | 21 | .NNSKST | .EETTEE | .abaabb |
1k7w_A_281 | 1k7w | A | 281 | 287 | TGASLMP | EEETTEE | bbbaaba |
1kbi_A_20 | 1kbi | A | 20 | 25 | .NKPDDC | .EETTEE | .abaabb |
1lj0_A_16 | 1lj0 | A | 16 | 21 | .NTSEET | .EETTEE | .abaabb |
1n7o_A_817 | 1n7o | A | 819 | 825 | ENNETLQ | EESSSEE | bbbaabb |
1nbc_A_74 | 1nbc | A | 83 | 89 | SSTNNAD | EEETTEE | bbbaaba |
1nkr_*_173 | 1nkr | - | 179 | 185 | GSFHDSP | EEETTEE | bbbaaba |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1cxy_A_19 | 1cxy | A | HEMPROTOPORPHYRIN IX CONTAINING FE | M - 26 |
1cxy_A_19 | 1cxy | A | HEMPROTOPORPHYRIN IX CONTAINING FE | I - 28 |
1cyo_*_16 | 1cyo | * | HEMPROTOPORPHYRIN IX CONTAINING FE | L - 23 |
1cyo_*_16 | 1cyo | * | HEMPROTOPORPHYRIN IX CONTAINING FE | L - 25 |
1k7w_A_281 | 1k7w | A | AS1ARGININOSUCCINATE | T - 281 |
1k7w_A_281 | 1k7w | A | AS1ARGININOSUCCINATE | G - 282 |
1k7w_A_281 | 1k7w | A | AS1ARGININOSUCCINATE | A - 283 |
1k7w_A_281 | 1k7w | A | AS1ARGININOSUCCINATE | N - 291 |
1kbi_A_20 | 1kbi | A | HEMPROTOPORPHYRIN IX CONTAINING FE | V - 27 |
1kbi_A_20 | 1kbi | A | HEMPROTOPORPHYRIN IX CONTAINING FE | I - 29 |
1lj0_A_16 | 1lj0 | A | MGMAGNESIUM ION | E - 20 |
1lj0_A_16 | 1lj0 | A | MGMAGNESIUM ION | W - 22 |
1lj0_A_16 | 1lj0 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | M - 23 |
Clusters included in this Subclass |
CLUSTER: HA.1.53 |
CLUSTER: HA.2.59 |
CLUSTER: HA.3.252 |