Information on SUBCLASS 2.2.15 |
Subclass Accession number: 6060
Subclass: 2.2.15 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 9 Average sequence ID (%) : 28.0 +/- 31.8 Average RMSD (Å) : 0.422 +/- 0.172 Consensus geometry
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Consensus Sequence: | XpppXh |
(φψ)-conformation: | abaabb |
Pattern: | [chy] | [gsv] | [GILV] | [dstv] | [hly] | [itvw] | [DGNRS] | [DNPQT] | [GKNQRST] | [HLW] | [FIKV] | [lmy] |
Conservation: | 0.902 | -0.707 | -0.994 | -1.229 | -0.469 | -1.214 | 0.648 | 0.076 | -0.114 | 2.145 | 0.459 | 0.496 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a8p_*_4 | 1a8p | - | 10 | 21 | LSVHHWNDTLFS | EEEEEEETTEEE | abbbxabaabbb |
1bru_P_37 | 1bru | P | 42 | 53 | CGGTLVDQSWVL | EEEEEEETTEEE | bxbbxabaabbx |
1elt_*_37 | 1elt | - | 42 | 53 | CGGSLIRQGWVM | EEEEEEETTEEE | bbbbxabaabbb |
1gvk_B_37 | 1gvk | B | 42 | 53 | CGGTLIRQNWVM | EEEEEEETTEEE | bxbbxabaabbx |
1npm_A_39 | 1npm | A | 42 | 53 | CGGVLVGDRWVL | EEEEEEETTEEE | bxbbxabaabbx |
1nyc_A_72 | 1nyc | A | 77 | 88 | YILDYDDTQHIL | EEEEEEETTEEE | bbbbxabaabbb |
1qcs_A_34 | 1qcs | A | 34 | 45 | HVIVRTSPNHKY | EEEEEEETTEEE | bbbbbabaabbb |
2hlc_A_39 | 2hlc | A | 42 | 53 | CGGSLIDNKWIL | EEEEEEETTEEE | bxbbxabaabbb |
2pka_A_39 | 2pka | A | 42 | 53 | CGGVLVNPKWVL | EEEEEEETTEEE | bbbbxabaabbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1bru_P_37 | 1bru | P | 1NB2-(2-HYDROXY-CYCLOPENTYL)-PENT-4-ENAL | T - 41 |
1bru_P_37 | 1bru | P | 1NB2-(2-HYDROXY-CYCLOPENTYL)-PENT-4-ENAL | C - 42 |
Clusters included in this Subclass |
CLUSTER: HA.1.35 |