Logo
Information on SUBCLASS 2.2.16
Subclass Accession number: 6061
Subclass: 2.2.16 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 9

Average sequence ID (%) : 22.2 +/- 20.2
Average RMSD (Å) : 0.411 +/- 0.060

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: XXpXGX
(φψ)-conformation: bbaaeb
Pattern: x[ailt][gltv]x[dgns][hknpqrs]x[G]xx
Conservation:-0.412-0.089-0.403-0.4370.286-0.183-0.4802.748-0.372-0.659
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1e54_A_761e54   A7988VSLSGNFGEVEEEEETTEEEbbbbbaaebb
1fgu_A_2101fgu   A210219RTWSNSRGEGEEEEETTEEEbbbbbaaexb
1jov_A_211jov   A2433LHLKHAVGTAEEEEETTEEExbbbbaaebb
1lld_A_2751lld   A279288PTLLNRQGVNEEEEETTEEEwbxbbaaebb
1obb_A_3891obb   A393402PALVDKNGIHEEEEETTEEEwbxbbaaexb
1qpc_A_2451qpc   A250259RLGAGQFGEVEEEEETTEEExabbbaaebb
1r0p_A_10761r0p   A10831092VIGRGHFGCVEEEEETTEEExabbbaaebb
1rl6_A_221rl6   A2332VTVKGPKGELEEEEETTEEEbbbbbaaebb
1tmo_*_101tmo   -1019LTTGSHFGAFEEEEETTEEEbbbbbaaexb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1jov_A_211jov   A     TMNTRIS(HYDROXYMETHYL)AMINOMETHANE T - 32
1obb_A_3891obb   A     CSWCYSTEINE-S-DIOXIDE E - 391
1qpc_A_2451qpc   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER L - 251
1qpc_A_2451qpc   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER G - 252
1qpc_A_2451qpc   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER A - 253
1qpc_A_2451qpc   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER V - 259
1r0p_A_10761r0p   A     KSAK-252A I - 1084
1r0p_A_10761r0p   A     KSAK-252A G - 1085
1r0p_A_10761r0p   A     KSAK-252A R - 1086
1r0p_A_10761r0p   A     KSAK-252A G - 1087
1r0p_A_10761r0p   A     KSAK-252A F - 1089
1r0p_A_10761r0p   A     KSAK-252A V - 1092

Clusters included in this Subclass
CLUSTER: HA.1.30