Information on SUBCLASS 2.2.16 |
Subclass Accession number: 6061
Subclass: 2.2.16 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 9 Average sequence ID (%) : 22.2 +/- 20.2 Average RMSD (Å) : 0.411 +/- 0.060 Consensus geometry
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Consensus Sequence: | XXpXGX |
(φψ)-conformation: | bbaaeb |
Pattern: | x | [ailt] | [gltv] | x | [dgns] | [hknpqrs] | x | [G] | x | x |
Conservation: | -0.412 | -0.089 | -0.403 | -0.437 | 0.286 | -0.183 | -0.480 | 2.748 | -0.372 | -0.659 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1e54_A_76 | 1e54 | A | 79 | 88 | VSLSGNFGEV | EEEEETTEEE | bbbbbaaebb |
1fgu_A_210 | 1fgu | A | 210 | 219 | RTWSNSRGEG | EEEEETTEEE | bbbbbaaexb |
1jov_A_21 | 1jov | A | 24 | 33 | LHLKHAVGTA | EEEEETTEEE | xbbbbaaebb |
1lld_A_275 | 1lld | A | 279 | 288 | PTLLNRQGVN | EEEEETTEEE | wbxbbaaebb |
1obb_A_389 | 1obb | A | 393 | 402 | PALVDKNGIH | EEEEETTEEE | wbxbbaaexb |
1qpc_A_245 | 1qpc | A | 250 | 259 | RLGAGQFGEV | EEEEETTEEE | xabbbaaebb |
1r0p_A_1076 | 1r0p | A | 1083 | 1092 | VIGRGHFGCV | EEEEETTEEE | xabbbaaebb |
1rl6_A_22 | 1rl6 | A | 23 | 32 | VTVKGPKGEL | EEEEETTEEE | bbbbbaaebb |
1tmo_*_10 | 1tmo | - | 10 | 19 | LTTGSHFGAF | EEEEETTEEE | bbbbbaaexb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1jov_A_21 | 1jov | A | TMNTRIS(HYDROXYMETHYL)AMINOMETHANE | T - 32 |
1obb_A_389 | 1obb | A | CSWCYSTEINE-S-DIOXIDE | E - 391 |
1qpc_A_245 | 1qpc | A | ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | L - 251 |
1qpc_A_245 | 1qpc | A | ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | G - 252 |
1qpc_A_245 | 1qpc | A | ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | A - 253 |
1qpc_A_245 | 1qpc | A | ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | V - 259 |
1r0p_A_1076 | 1r0p | A | KSAK-252A | I - 1084 |
1r0p_A_1076 | 1r0p | A | KSAK-252A | G - 1085 |
1r0p_A_1076 | 1r0p | A | KSAK-252A | R - 1086 |
1r0p_A_1076 | 1r0p | A | KSAK-252A | G - 1087 |
1r0p_A_1076 | 1r0p | A | KSAK-252A | F - 1089 |
1r0p_A_1076 | 1r0p | A | KSAK-252A | V - 1092 |
Clusters included in this Subclass |
CLUSTER: HA.1.30 |