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Information on SUBCLASS 2.2.20
Subclass Accession number: 6065
Subclass: 2.2.20 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 7

Average sequence ID (%) : 7.4 +/- 11.6
Average RMSD (Å) : 0.329 +/- 0.076

Consensus geometry
d (Å): 3 delta (°): 45-90 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: hphppX
(φψ)-conformation: bpaaba
Pattern: [CFILPY][dhknq][lmpv][dknqsy][DENQ]x[EHNQST][iklv][cktv]
Conservation:-0.5020.015-0.438-0.4602.328-1.1840.654-0.273-0.140
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ac5_*_2931ac5   -294302LNMYNFNLKEETTEEEEExxaabaabb
1efu_B_2321efu   B232240PFVMEPSKTEETTEEEEExpaabaabx
1ncf_A_191ncf   A2129IHPQNNSICEETTEEEEExpaabaabb
1orv_A_4301orv   A434442IQLNDYTKVEETTEEEEEbxaabaaxb
1pgu_A_4691pgu   A472480FKLSDLEVSEETTEEEEExxaabaabb
1r42_A_1311r42   A133141CNPDNPQECEETTEEEEEbpaabaaxb
1rv1_A_671rv1   A6775YDEKQQHIVEETTEEEEExxaabaaxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1rv1_A_671rv1   A     IMZCIS-[4,5-BIS-(4-BROMOPHENYL)-2-(2-ETHOXY-4-METHOXYPHENYL)-4,5-DIHYDROIMIDAZOL-1-YL]-[4-(2-HYDROXYETHYL)PIPERAZIN-1-YL]METHANONE Y - 67
1rv1_A_671rv1   A     IMZCIS-[4,5-BIS-(4-BROMOPHENYL)-2-(2-ETHOXY-4-METHOXYPHENYL)-4,5-DIHYDROIMIDAZOL-1-YL]-[4-(2-HYDROXYETHYL)PIPERAZIN-1-YL]METHANONE Q - 71
1rv1_A_671rv1   A     IMZCIS-[4,5-BIS-(4-BROMOPHENYL)-2-(2-ETHOXY-4-METHOXYPHENYL)-4,5-DIHYDROIMIDAZOL-1-YL]-[4-(2-HYDROXYETHYL)PIPERAZIN-1-YL]METHANONE Q - 72
1rv1_A_671rv1   A     IMZCIS-[4,5-BIS-(4-BROMOPHENYL)-2-(2-ETHOXY-4-METHOXYPHENYL)-4,5-DIHYDROIMIDAZOL-1-YL]-[4-(2-HYDROXYETHYL)PIPERAZIN-1-YL]METHANONE H - 73
1rv1_A_671rv1   A     IMZCIS-[4,5-BIS-(4-BROMOPHENYL)-2-(2-ETHOXY-4-METHOXYPHENYL)-4,5-DIHYDROIMIDAZOL-1-YL]-[4-(2-HYDROXYETHYL)PIPERAZIN-1-YL]METHANONE I - 74
1rv1_A_671rv1   A     IMZCIS-[4,5-BIS-(4-BROMOPHENYL)-2-(2-ETHOXY-4-METHOXYPHENYL)-4,5-DIHYDROIMIDAZOL-1-YL]-[4-(2-HYDROXYETHYL)PIPERAZIN-1-YL]METHANONE V - 75

Clusters included in this Subclass
CLUSTER: HA.1.46