Information on SUBCLASS 2.2.45 |
Subclass Accession number: 6090
Subclass: 2.2.45 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 25.0 +/- 23.4 Average RMSD (Å) : 0.333 +/- 0.058 Consensus geometry
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Consensus Sequence: | hppDXX |
(φψ)-conformation: | abaabb |
Pattern: | [CL] | [KR] | x | [CIV] | [ADG] | [GK] | [EFK] | x | [IL] | [RS] | [DHR] | [D] | [FTV] | x | x | [FT] |
Conservation: | 0.288 | 1.195 | -0.488 | 0.122 | -0.616 | -0.103 | -0.944 | -1.027 | 0.810 | -0.134 | -0.370 | 2.995 | -0.698 | -0.689 | -0.392 | 0.050 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1i7p_A_42 | 1i7p | A | 44 | 59 | LRLIDKEILSHDTRRF | EEEEEEEEEETTEEEE | bxxabbbxabaabbbb |
1iau_A_39 | 1iau | A | 39 | 54 | LKRCGGFLIRDDFVLT | EEEEEEEEEETTEEEE | xbbbxbbxabaabbbb |
2cnd_*_13 | 2cnd | - | 15 | 30 | CRLVAKKELSRDVRLF | EEEEEEEEEETTEEEE | bxxabbbxabaabbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1iau_A_39 | 1iau | A | NAGN-ACETYL-D-GLUCOSAMINE | L - 39 |
1iau_A_39 | 1iau | A | ASAASPARTIC ALDEHYDE | K - 40 |
1iau_A_39 | 1iau | A | ASAASPARTIC ALDEHYDE | R - 41 |
1iau_A_39 | 1iau | A | ASAASPARTIC ALDEHYDE | C - 42 |
Clusters included in this Subclass |
CLUSTER: HA.1.127 |
CLUSTER: HA.3.216 |