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Information on SUBCLASS 2.3.4
Subclass Accession number: 6105
Subclass: 2.3.4 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 37

Average sequence ID (%) : 11.1 +/- 14.3
Average RMSD (Å) : 0.308 +/- 0.169

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: XXcXXX
(φψ)-conformation: bbeabb
Pattern: xxx[adgkqr][adegknrst]xx
Conservation:-0.555-0.431-0.3922.2010.125-0.329-0.620
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1abr_A_751abr   A7884YRAGTQSEE-SSEEbbbeabb
1aug_A_321aug   A3237.AEGPAS.EETTEE.bbeaxb
1czs_A_761czs   A7682CKSLSSEEEETTEEbbbeaxb
1ekf_A_2341ekf   A236242TEVGTMNEEETTEEabbeabx
1f6b_A_631f6b   A6470LTIAGMTEEETTEEbbbeabb
1fnf_*_13921fnf   -13991405ALNGREEEEETTEExbbeaxb
1fo0_A_581fo0   A5863.TVGHYS.EETTEE.bbeabb
1g0u_I_341g0u   I3541FHYGHVFEESSSEEbbbeabb
1i8d_A_471i8d   A5359EINGNHVEEETTEEbbbeaxb
1ig3_A_1731ig3   A175181IIQKDSLEEETTEEbbbeabb
1jln_A_4011jln   A402408GIYGKVEEEETTEEbbbeabb
1jwy_A_1271jwy   A128134TYSGLFLEE-SSEEbxbeabb
1ksi_A_2371ksi   A238244VSWANWKEEETTEExbbeabb
1lar_A_14431lar   A14441450ETCGLIQEEETTEEbbbeabx
1lar_A_17331lar   A17331739ARYQYFVEEETTEEbbbeabx
1mpg_A_351mpg   A3945LAVGEYREEETTEEbbbeaxb
1n7v_A_4671n7v   A469475YPEAAYYEEETTEEbxbeabb
1nqj_A_9721nqj   A972978QVDGNKVEEETTEEbxbeabb
1nvp_C_3341nvp   C343349HRSKNKWEEETTEEbbbeabb
1oac_A_3221oac   A323329IHWRNWDEEETTEEbbbeaxb
1obf_O_3021obf   O302308KVSGRLVEEETTEEbbbeaxb
1ohw_A_4031ohw   A406412RGRGTFCEEETTEEbebeaxb
1pam_A_6471pam   A654660KKQGSTVEEETTEEbbbeaxb
1poa_*_691poa   -7076ECSQGTLEEETTEEbbbeabb
1pwb_A_2371pwb   A238244QSVGEKIEEETTEEbbbeaxb
1qdl_A_3781qdl   A380386FLNKELLEEETTEEbbbeabb
1qy6_A_1431qy6   A152158YLKGEAMEEETTEEbbbeabb
1rwh_A_4751rwh   A478484TALGEVAEEETTEEbbbeabb
1ten_*_8681ten   -875881SRRGDMSEEETTEExbbeaxb
1umr_C_2091umr   C209215SSYDRYCEEETTEEbbbeabb
1ut7_A_881ut7   A8894RVAGSGYEEETTEExxbeabb
1vk6_A_1361vk6   A136141.RRDDSI.EETTEE.xbeabb
1yfo_A_3501yfo   A351357WTYGNVREEETTEEbbbeabx
1ytf_C_2431ytf   C252258TRTKARWEEETTEEbbbeabb
2jel_H_882jel   H94100RVMGEQYEEETTEExbbeaba
2shp_A_3772shp   A378384KEYGVMREEETTEEbbbeabb
3cla_*_1793cla   -179185QQEGDRLEEETTEEbxbeabb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1czs_A_761czs   A     PHGPHENYLMERCURY C - 76
1czs_A_761czs   A     PHGPHENYLMERCURY K - 77
1czs_A_761czs   A     PHGPHENYLMERCURY S - 78
1czs_A_761czs   A     PHGPHENYLMERCURY S - 81
1czs_A_761czs   A     PHGPHENYLMERCURY E - 82
1czs_A_761czs   A     PHGPHENYLMERCURY M - 83
1ekf_A_2341ekf   A     PLPPYRIDOXAL-5'-PHOSPHATE E - 237
1ekf_A_2341ekf   A     PLPPYRIDOXAL-5'-PHOSPHATE G - 239
1ekf_A_2341ekf   A     PLPPYRIDOXAL-5'-PHOSPHATE T - 240
1ekf_A_2341ekf   A     PLPPYRIDOXAL-5'-PHOSPHATE M - 241
1ekf_A_2341ekf   A     PLPPYRIDOXAL-5'-PHOSPHATE N - 242
1f6b_A_631f6b   A     GDPGUANOSINE-5'-DIPHOSPHATE T - 73
1f6b_A_631f6b   A     MGMAGNESIUM ION D - 75
1f6b_A_631f6b   A     GDPGUANOSINE-5'-DIPHOSPHATE D - 75
1jwy_A_1271jwy   A     ADPADENOSINE-5'-DIPHOSPHATE Y - 127
1jwy_A_1271jwy   A     ADPADENOSINE-5'-DIPHOSPHATE V - 137
1obf_O_3021obf   O     CSWCYSTEINE-S-DIOXIDE Y - 314
1rwh_A_4751rwh   A     GOLGLYCEROL L - 480
1rwh_A_4751rwh   A     GOLGLYCEROL G - 481
1rwh_A_4751rwh   A     GOLGLYCEROL E - 482
1rwh_A_4751rwh   A     GOLGLYCEROL V - 483
1ut7_A_881ut7   A     AUGOLD ION T - 106
1vk6_A_1361vk6   A     MSESELENOMETHIONINE R - 136

Clusters included in this Subclass
CLUSTER: HA.1.17
CLUSTER: HA.1.43
CLUSTER: HA.2.104
CLUSTER: HA.2.32
CLUSTER: HA.3.140
CLUSTER: HA.3.226
CLUSTER: HA.3.48